Open andhamel opened 2 years ago
It's pretty easy. you can set marker size to be 1 by the parameter s
, such as:
ax = manhattanplot(data=df,
sign_marker_p=1e-6, # highline the significant SNP with ``sign_marker_color`` color.
is_annotate_topsnp=True, # annotate the top SNP
hline_kws={"linestyle": "--", "lw": 1.3},
s=1, # set the size of marker in scatter plot to be 1 (very small)
xticklabel_kws={"rotation": "vertical"})
Since qmplot
is developed based on matplotlib
, you can use any other keyword arguments which are passed to plt.scatter()
in matplotlib.
Hello,
I'm reading through the documentation for qmplot and making a Manhattan plot. Very useful!
I was wondering if it's possible to decrease the marker size. In ax.scatter(), I can normally add in a s=size argument. How would I pass that into the Manhattan plot function? I see there is an option for **kwargs.
Thanks in advance!