Annotation feature is very limited

ShujiaHuang / qmplot

A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.

GNU General Public License v3.0

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Annotation feature is very limited #9

Open jorgeamaya opened 2 years ago

jorgeamaya commented 2 years ago

Is there a way to annotate and highlight more SNPs than just the SNP with the top p-value? For example, by providing a list of SNPs to annotate or regions to annotate. I need to annotate more features than just the most suggestive SNP.

igumnov-daniel commented 1 year ago

+ The option to provide a list of SNVs to both highlight and annotate points in the plot would be great. Because now it's possible to only highlight them (or maybe I just haven't found the right way to annotate these points as well)

update added such an option in the PR https://github.com/ShujiaHuang/qmplot/pull/13