added my notebook with updated bokeh plots and nucleotides

Shuyib / Phylogenetic-tree-study

Estimating Phylogenetic trees using six microorganisms 16S rRNA gene with Unsupervised Learning, web based tools and Molecular Evolutionary Genetics Analysis MEGA7

https://github.com/Shuyib/Phylogenetic-tree-study/wiki

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added my notebook with updated bokeh plots and nucleotides #64

Open Ephantus-Wambui opened 6 months ago

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smith-kyle commented 5 months ago

Just a heads up, you can review notebook changes like this using GitNotebooks.

e.g. this pull request https://gitnotebooks.com/Shuyib/Phylogenetic-tree-study/pull/64

It allows inline comments on code and markdown, and it's free for public repos so I thought I'd share..

Shuyib commented 5 months ago

Hi @Ephantus-Wambui thanks for the contribution. I was hoping that you'd use the sequences that are generated by the functions that were written in the past. For example, the multifastaloader.py. The Makefile run script section has more information.