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SimonGreenhill / treemaker

A Python library for creating a Newick formatted tree from a set of classification strings
BSD 3-Clause "New" or "Revised" License
8 stars 2 forks source link

Update sphinx to 2.1.2 #22

Closed pyup-bot closed 5 years ago

pyup-bot commented 5 years ago

This PR updates sphinx from 1.8.5 to 2.1.2.

Changelog ### 2.1.2 ``` ============================== Dependencies ------------ Incompatible changes -------------------- Deprecated ---------- Features added -------------- Bugs fixed ---------- Testing -------- ``` ### 2.1.1 ``` ===================================== Incompatible changes -------------------- * 6447: autodoc: Stop to generate document for undocumented module variables Bugs fixed ---------- * 6442: LaTeX: admonitions of :rst:dir:`note` type can get separated from immediately preceding section title by pagebreak * 6448: autodoc: crashed when autodocumenting classes with ``__slots__ = None`` * 6451: autodoc: generates docs for "optional import"ed modules as variables * 6452: autosummary: crashed when generating document of properties * 6455: napoleon: docstrings for properties are not processed * 6436: napoleon: "Unknown target name" error if variable name ends with underscore * 6440: apidoc: missing blank lines between modules ``` ### 2.1.0 ``` ===================================== Incompatible changes -------------------- * Ignore filenames without file extension given to ``Builder.build_specific()`` API directly * 6230: The anchor of term in glossary directive is changed if it is consisted by non-ASCII characters * 4550: html: Centering tables by default using CSS * 6239: latex: xelatex and xeCJK are used for Chinese documents by default * ``Sphinx.add_lexer()`` now takes a Lexer class instead of instance. An instance of lexers are still supported until Sphinx-3.x. Deprecated ---------- * ``sphinx.builders.latex.LaTeXBuilder.apply_transforms()`` * ``sphinx.builders._epub_base.EpubBuilder.esc()`` * ``sphinx.directives.Acks`` * ``sphinx.directives.Author`` * ``sphinx.directives.Centered`` * ``sphinx.directives.Class`` * ``sphinx.directives.CodeBlock`` * ``sphinx.directives.Figure`` * ``sphinx.directives.HList`` * ``sphinx.directives.Highlight`` * ``sphinx.directives.Include`` * ``sphinx.directives.Index`` * ``sphinx.directives.LiteralInclude`` * ``sphinx.directives.Meta`` * ``sphinx.directives.Only`` * ``sphinx.directives.SeeAlso`` * ``sphinx.directives.TabularColumns`` * ``sphinx.directives.TocTree`` * ``sphinx.directives.VersionChange`` * ``sphinx.domains.python.PyClassmember`` * ``sphinx.domains.python.PyModulelevel`` * ``sphinx.domains.std.StandardDomain._resolve_citation_xref()`` * ``sphinx.domains.std.StandardDomain.note_citations()`` * ``sphinx.domains.std.StandardDomain.note_citation_refs()`` * ``sphinx.domains.std.StandardDomain.note_labels()`` * ``sphinx.environment.NoUri`` * ``sphinx.ext.apidoc.format_directive()`` * ``sphinx.ext.apidoc.format_heading()`` * ``sphinx.ext.apidoc.makename()`` * ``sphinx.ext.autodoc.importer.MockFinder`` * ``sphinx.ext.autodoc.importer.MockLoader`` * ``sphinx.ext.autodoc.importer.mock()`` * ``sphinx.ext.autosummary.autolink_role()`` * ``sphinx.ext.imgmath.DOC_BODY`` * ``sphinx.ext.imgmath.DOC_BODY_PREVIEW`` * ``sphinx.ext.imgmath.DOC_HEAD`` * ``sphinx.transforms.CitationReferences`` * ``sphinx.transforms.SmartQuotesSkipper`` * ``sphinx.util.docfields.DocFieldTransformer.preprocess_fieldtypes()`` * ``sphinx.util.node.find_source_node()`` * ``sphinx.util.i18n.find_catalog()`` * ``sphinx.util.i18n.find_catalog_files()`` * ``sphinx.util.i18n.find_catalog_source_files()`` For more details, see :ref:`deprecation APIs list <dev-deprecated-apis>`. Features added -------------- * Add a helper class ``sphinx.transforms.post_transforms.SphinxPostTransform`` * Add helper methods - ``PythonDomain.note_module()`` - ``PythonDomain.note_object()`` - ``SphinxDirective.set_source_info()`` * 6180: Support ``--keep-going`` with BuildDoc setup command * ``math`` directive now supports ``:class:`` option * 6310: imgmath: let :confval:`imgmath_use_preview` work also with the SVG format for images rendering inline math * todo: ``todo`` directive now supports ``:name:`` option * Enable override via environment of ``SPHINXOPTS`` and ``SPHINXBUILD`` Makefile variables (refs: 6232, 6303) * 6287: autodoc: Unable to document bound instance methods exported as module functions * 6289: autodoc: :confval:`autodoc_default_options` now supports ``imported-members`` option * 4777: autodoc: Support coroutine * 744: autodoc: Support abstractmethod * 6325: autodoc: Support attributes in __slots__. For dict-style __slots__, autodoc considers values as a docstring of the attribute * 6361: autodoc: Add :confval:`autodoc_typehints` to suppress typehints from signature * 1063: autodoc: ``automodule`` directive now handles undocumented module level variables * 6212 autosummary: Add :confval:`autosummary_imported_members` to display imported members on autosummary * 6271: ``make clean`` is catastrophically broken if building into '.' * 6363: Support ``%O%`` environment variable in make.bat * 4777: py domain: Add ``:async:`` option to :rst:dir:`py:function` directive * py domain: Add new options to :rst:dir:`py:method` directive - ``:abstractmethod:`` - ``:async:`` - ``:classmethod:`` - ``:property:`` - ``:staticmethod:`` * rst domain: Add :rst:dir:`directive:option` directive to describe the option for directive * 6306: html: Add a label to search form for accessability purposes * 4390: html: Consistent and semantic CSS for signatures * 6358: The ``rawsource`` property of ``production`` nodes now contains the full production rule * 6373: autosectionlabel: Allow suppression of warnings * coverage: Support a new ``coverage_ignore_pyobjects`` option * 6239: latex: Support to build Chinese documents Bugs fixed ---------- * 6230: Inappropriate node_id has been generated by glossary directive if term is consisted by non-ASCII characters * 6213: ifconfig: contents after headings are not shown * commented term in glossary directive is wrongly recognized * 6299: rst domain: rst:directive directive generates waste space * 6379: py domain: Module index (py-modindex.html) has duplicate titles * 6331: man: invalid output when doctest follows rubric * 6351: "Hyperlink target is not referenced" message is shown even if referenced * 6165: autodoc: ``tab_width`` setting of docutils has been ignored * 6347: autodoc: crashes with a plain Tuple on Python 3.6 and 3.5 * 6311: autosummary: autosummary table gets confused by complex type hints * 6350: autosummary: confused by an argument having some kind of default value * Generated Makefiles lack a final EOL (refs: 6232) * 6375: extlinks: Cannot escape angle brackets in link caption * 6378: linkcheck: Send commonly used User-Agent * 6387: html search: failed to search document with haiku and scrolls themes * 6408: html search: Fix the ranking of search results * 6406: Wrong year is returned for ``SOURCE_DATE_EPOCH`` * 6402: image directive crashes by unknown image format * 6286: C++, allow 8 and 9 in hexadecimal integer literals. * 6305: Fix the string in quickstart for 'path' argument of parser * LaTeX: Figures in admonitions produced errors (refs: 6364) ``` ### 2.0.1 ``` ===================================== Bugs fixed ---------- * LaTeX: some system labels are not translated * RemovedInSphinx30Warning is marked as pending * deprecation warnings are not emitted - sphinx.application.CONFIG_FILENAME - sphinx.builders.htmlhelp - :confval:`viewcode_import` * 6208: C++, properly parse full xrefs that happen to have a short xref as prefix * 6220, 6225: napoleon: AttributeError is raised for raised section having references * 6245: circular import error on importing SerializingHTMLBuilder * 6243: LaTeX: 'releasename' setting for latex_elements is ignored * 6244: html: Search function is broken with 3rd party themes * 6263: html: HTML5Translator crashed with invalid field node * 6262: html theme: The style of field lists has changed in bizstyle theme ``` ### 2.0.0 ``` * 6196: py domain: unexpected prefix is generated Testing -------- ``` ### 2.0.0b2 ``` * Add a helper function: ``sphinx.testing.restructuredtext.parse()`` ``` ### 2.0.0b1 ``` * Stop to use ``SPHINX_TEST_TEMPDIR`` envvar ```
Links - PyPI: https://pypi.org/project/sphinx - Changelog: https://pyup.io/changelogs/sphinx/ - Homepage: http://sphinx-doc.org/
coveralls commented 5 years ago

Coverage Status

Coverage remained the same at 100.0% when pulling ef13087c0236f4e4a0898a345bf1c9937a948a95 on pyup-update-sphinx-1.8.5-to-2.1.2 into 007c5a7a8fabdba0ac2d4189aa35dc94155d5c01 on master.