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SimonGreenhill / treemaker

A Python library for creating a Newick formatted tree from a set of classification strings
BSD 3-Clause "New" or "Revised" License
8 stars 2 forks source link

Update sphinx to 3.4.0 #45

Closed pyup-bot closed 3 years ago

pyup-bot commented 3 years ago

This PR updates sphinx from 3.3.1 to 3.4.0.

Changelog ### 3.4.0 ``` ===================================== Incompatible changes -------------------- * 8105: autodoc: the signature of class constructor will be shown for decorated classes, not a signature of decorator Deprecated ---------- * The ``follow_wrapped`` argument of ``sphinx.util.inspect.signature()`` * The ``no_docstring`` argument of ``sphinx.ext.autodoc.Documenter.add_content()`` * ``sphinx.ext.autodoc.Documenter.get_object_members()`` * ``sphinx.ext.autodoc.DataDeclarationDocumenter`` * ``sphinx.ext.autodoc.GenericAliasDocumenter`` * ``sphinx.ext.autodoc.InstanceAttributeDocumenter`` * ``sphinx.ext.autodoc.SlotsAttributeDocumenter`` * ``sphinx.ext.autodoc.TypeVarDocumenter`` * ``sphinx.ext.autodoc.importer._getannotations()`` * ``sphinx.ext.autodoc.importer._getmro()`` * ``sphinx.pycode.ModuleAnalyzer.parse()`` * ``sphinx.util.osutil.movefile()`` * ``sphinx.util.requests.is_ssl_error()`` Features added -------------- * 8119: autodoc: Allow to determine whether a member not included in ``__all__`` attribute of the module should be documented or not via :event:`autodoc-skip-member` event * 8219: autodoc: Parameters for generic class are not shown when super class is a generic class and show-inheritance option is given (in Python 3.7 or above) * autodoc: Add ``Documenter.config`` as a shortcut to access the config object * autodoc: Add Optional[t] to annotation of function and method if a default value equal to None is set. * 8209: autodoc: Add ``:no-value:`` option to :rst:dir:`autoattribute` and :rst:dir:`autodata` directive to suppress the default value of the variable * 8460: autodoc: Support custom types defined by typing.NewType * 8285: napoleon: Add :confval:`napoleon_attr_annotations` to merge type hints on source code automatically if any type is specified in docstring * 8236: napoleon: Support numpydoc's "Receives" section * 6914: Add a new event :event:`warn-missing-reference` to custom warning messages when failed to resolve a cross-reference * 6914: Emit a detailed warning when failed to resolve a ``:ref:`` reference * 6629: linkcheck: The builder now handles rate limits. See :confval:`linkcheck_retry_on_rate_limit` for details. Bugs fixed ---------- * 7613: autodoc: autodoc does not respect __signature__ of the class * 4606: autodoc: the location of the warning is incorrect for inherited method * 8105: autodoc: the signature of class constructor is incorrect if the class is decorated * 8434: autodoc: :confval:`autodoc_type_aliases` does not effect to variables and attributes * 8443: autodoc: autodata directive can't create document for PEP-526 based type annotated variables * 8443: autodoc: autoattribute directive can't create document for PEP-526 based uninitalized variables * 8480: autodoc: autoattribute could not create document for __slots__ attributes * 8503: autodoc: autoattribute could not create document for a GenericAlias as class attributes correctly * 8534: autodoc: autoattribute could not create document for a commented attribute in alias class * 8452: autodoc: autodoc_type_aliases doesn't work when autodoc_typehints is set to "description" * 8541: autodoc: autodoc_type_aliases doesn't work for the type annotation to instance attributes * 8460: autodoc: autodata and autoattribute directives do not display type information of TypeVars * 8493: autodoc: references to builtins not working in class aliases * 8522: autodoc: ``__bool__`` method could be called * 8067: autodoc: A typehint for the instance variable having type_comment on super class is not displayed * 8545: autodoc: a __slots__ attribute is not documented even having docstring * 741: autodoc: inherited-members doesn't work for instance attributes on super class * 8477: autosummary: non utf-8 reST files are generated when template contains multibyte characters * 8501: autosummary: summary extraction splits text after "el at." unexpectedly * 8524: html: Wrong url_root has been generated on a document named "index" * 8419: html search: Do not load ``language_data.js`` in non-search pages * 8549: i18n: ``-D gettext_compact=0`` is no longer working * 8454: graphviz: The layout option for graph and digraph directives don't work * 8131: linkcheck: Use GET when HEAD requests cause Too Many Redirects, to accommodate infinite redirect loops on HEAD * 8437: Makefile: ``make clean`` with empty BUILDDIR is dangerous * 8365: py domain: ``:type:`` and ``:rtype:`` gives false ambiguous class lookup warnings * 8352: std domain: Failed to parse an option that starts with bracket * 8519: LaTeX: Prevent page brake in the middle of a seealso * 8520: C, fix copying of AliasNode. ```
Links - PyPI: https://pypi.org/project/sphinx - Changelog: https://pyup.io/changelogs/sphinx/ - Homepage: http://sphinx-doc.org/
coveralls commented 3 years ago

Coverage Status

Coverage remained the same at 100.0% when pulling ddaf95f27522955212f97fdfea71acdb20f25c39 on pyup-update-sphinx-3.3.1-to-3.4.0 into 4a6f22400561b21667ec34f34d8bda8636700fb6 on master.

pyup-bot commented 3 years ago

Closing this in favor of #46