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SingleMolecule / iSBatch

Hierarchical batch plugin for ImageJ
http://singlemolecule.github.io/iSBatch/
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Error when running Set Background #19

Closed Jhsmit closed 9 years ago

Jhsmit commented 9 years ago

///// convert fileNode does not apply to this level. Exception in thread "Thread-32" java.lang.IndexOutOfBoundsException: Index: 0, Size: 0 at java.util.ArrayList.RangeCheck(ArrayList.java:547) at java.util.ArrayList.get(ArrayList.java:322) at imageOperations.NodeToImageStack.(NodeToImageStack.java:35) at operations.flatImages.SetBackGround.run(SetBackGround.java:202) at operations.flatImages.SetBackGround.visit(SetBackGround.java:250) at model.Sample.accept(Sample.java:44) at operations.OperationRunner.run(OperationRunner.java:52) at java.lang.Thread.run(Thread.java:662)

vcaldas commented 9 years ago

@Jhsmit I could not reproduce the error. Could you send more details? Looks like some parameters are wrong when you import the files into the database. If possible, check your import parameters with a smaller dataset and let me know.