Closed PeteHaitch closed 5 years ago
Probably one for @friedue.
table(SingleR::HumanPrimaryCellAtlasData()$label.main) #> #> Astrocyte B_cell BM #> 2 26 7 #> BM & Prog. Chondrocytes CMP #> 1 8 2 #> DC Embryonic_stem_cells Endothelial_cells #> 88 17 64 #> Epithelial_cells Erythroblast Fibroblasts #> 16 8 10 #> Gametocytes GMP Hepatocytes #> 5 2 3 #> HSC_-G-CSF HSC_CD34+ iPS_cells #> 10 6 42 #> Keratinocytes Macrophage MEP #> 25 90 2 #> Monocyte MSC Myelocyte #> 60 9 2 #> Neuroepithelial_cell Neurons Neutrophil #> 1 16 3 #> Neutrophils NK_cell Osteoblasts #> 18 5 15 #> Platelets Pre-B_cell_CD34- Pro-B_cell_CD34+ #> 5 2 2 #> Pro-Myelocyte Smooth_muscle_cells T_cells #> 2 16 68 #> Tissue_stem_cells #> 55
Created on 2019-08-30 by the reprex package (v0.3.0)
Looking at how they get broken down in the 'fine' label:
Neutrophil Neutrophils Neutrophil 3 3 Neutrophil:commensal_E._coli_MG1655 0 2 Neutrophil:GM-CSF_IFNg 0 4 Neutrophil:inflam 0 4 Neutrophil:LPS 0 4 Neutrophil:uropathogenic_E._coli_UTI89 0 1
Should 'Neutrophil' and 'Neutrophils' be one 'main' label or is there a distinction I'm missing?
Nice catch! I'll defer to @dviraran
I'm just going to rename it all to Neutrophils.
Neutrophils
Probably one for @friedue.
Created on 2019-08-30 by the reprex package (v0.3.0)
Looking at how they get broken down in the 'fine' label:
Should 'Neutrophil' and 'Neutrophils' be one 'main' label or is there a distinction I'm missing?