PIRATE -c doesn't work (but --check does)

SionBayliss / PIRATE

A toolbox for pangenome analysis and threshold evaluation.

GNU General Public License v3.0

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PIRATE -c doesn't work (but --check does) #39

Closed tseemann closed 4 years ago

tseemann commented 4 years ago

PIRATE -c doesn't work (but --check does) Conflict with another -c ?

SionBayliss commented 4 years ago

Looks like a bug I introduced by adding another spectacularly well named option --check-n. I have fixed this and will push another version with some additional fixes to your other issues soon.