fasttree vs FastTree ? - Githubissues

SionBayliss / PIRATE

A toolbox for pangenome analysis and threshold evaluation.

GNU General Public License v3.0

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Closed tseemann closed 5 years ago

tseemann commented 5 years ago

./PIRATE  --check
 - WARNING: fasttree not found in system path, a binary presence-absence tree will not be created.

The standard exe name is FastTree - any chance you can support both?

I did cd PIRATE/bin && ln -s $(which FastTree) fasttree for now

SionBayliss commented 5 years ago

Both invocations should be supported on newest branch (split_correction) which will become the release version shortly.