QC-Dublin_633

[SiyiSEA]

To Do List

• [x] match the genetic data with the phenotype data and methylation data
• [x] 633 samples are overlapped between the fam file and the pheno file
• [x] PCA the Dulin_633
• [x] If there is no outlier - skip QC
• [ ] If yes, re-run the qc
• [ ] run the imputation HRC
• [ ] post-qc ready for the GoDMCII

[SiyiSEA]

The data is been QCd!

[SiyiSEA]

Since this dataset contains too many missing genotype, we switch to another version which is done the QC and imputation.

To Do:

• [ ] Run the PCA
• [ ] ready for the GoDMC II