Bump igraph from 0.9.8 to 0.11.4

[dependabot[bot]]

Bumps igraph from 0.9.8 to 0.11.4.

Release notes

Sourced from igraph's releases.

igraph 0.11.4

Added

• Added Graph.Prufer() to construct a graph from a Prüfer sequence.

• Added Graph.Bipartite_Degree_Sequence() to construct a bipartite graph from a bidegree sequence.

Fixed

• Fixed import of graph-tool graphs for vertex properties where each property has a vector value.

• Graph.Adjacency() now accepts Matrix instances and other sequences as an input, it is not limited to lists-of-lists-of-ints any more.

igraph 0.11.3

Added

• Added Graph.__invalidate_cache() for debugging and benchmarking purposes.

Changed

• The C core of igraph was updated to version 0.10.8.

Fixed

• Removed incorrectly added loops=... argument of Graph.is_bigraphical().
• Fixed a bug in the Matplotlib graph drawing backend that filled the interior of undirected curved edges.

igraph 0.11.2

Added

• python-igraph is now tested in Python 3.12.

• Added weights=... keyword argument to Graph.layout_kamada_kawai().

Changed

• The matplotlib plotting infrastructure underwent major surgery and is now able to show consistent vertex and edge drawings at any level of zoom, including with animations, and for any aspect ratio.
• As a consequence of the restructuring at the previous point, vertex sizes are now specified in figure points and are not affected by axis limits or zoom. With the current conventions, vertex_size=25 is a reasonable size for igraph.plot.
• As another consequence of the above, vertex labels now support offsets from the vertex center, in figure point units.
• As another consequence of the above, self loops are now looking better and their size can be controlled using the edge_loop_size argument in igraph.plot.
• As another consequence of the above, if using the matplotlib backend when plotting a graph, igraph.plot now does not return the Axes anymore. Instead, it returns a container artist called GraphArtist, which contains as children the elements of the graph plot: a VertexCollection for the vertices, and EdgeCollection for the edges, and so on. These objects can be used to modify the plot after the initial rendering, e.g. inside a Jupyter notebook, to fine tune the appearance of the plot. While documentation on specific graphic elements is still scant, more descriptive examples will follow in the future.

Fixed

• Fixed drawing order of vertices in the Plotly backend (#691).

• Fixed plotting of null graphs with the Matplotlib backend.

Removed

... (truncated)

Changelog

Sourced from igraph's changelog.

[0.11.4]

Added

• Added Graph.Prufer() to construct a graph from a Prüfer sequence.

• Added Graph.Bipartite_Degree_Sequence() to construct a bipartite graph from a bidegree sequence.

Fixed

• Fixed import of graph-tool graphs for vertex properties where each property has a vector value.

• Graph.Adjacency() now accepts Matrix instances and other sequences as an input, it is not limited to lists-of-lists-of-ints any more.

[0.11.3] - 2023-11-19

Added

• Added Graph.__invalidate_cache() for debugging and benchmarking purposes.

Changed

• The C core of igraph was updated to version 0.10.8.

Fixed

• Removed incorrectly added loops=... argument of Graph.is_bigraphical().

• Fixed a bug in the Matplotlib graph drawing backend that filled the interior of undirected curved edges.

[0.11.2] - 2023-10-12

Fixed

• Fixed plotting of null graphs with the Matplotlib backend.

[0.11.0] - 2023-10-12

Added

• python-igraph is now tested in Python 3.12.

• Added weights=... keyword argument to Graph.layout_kamada_kawai().

Changed

• The matplotlib plotting infrastructure underwent major surgery and is now able to show consistent vertex and edge drawings at any level of zoom, including with animations, and for any aspect ratio.

... (truncated)

Commits

• e594422 chore: bumped version to 0.11.4
• a95e22f doc: clarify specification of same color for all vertices when plotting
• beefef0 chore: updated changelog [ci skip]
• b5a4a44 chore: update C core to 0.10.10
• eb9c9ca Merge pull request #756 from igraph/feat/realize_bipartite_degree_sequence
• d4c8fe0 fix: make sure that degrees2 is not optional in Graph.Realize_Bipartite_Degre...
• a607205 feat: Realize_Bipartite_Degree_Sequence()
• bbf8bde chore: update C core to 0.10.9
• 5fb9c05 docs: fix some typos
• a88431f ci: update cibuildwheel
• Additional commits viewable in compare view

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[dependabot[bot]]

Superseded by #38.