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SlavovLab / DART-ID

DART-ID: retention time alignment and peptide identification confidence updates
https://dart-id.slavovlab.net
MIT License
14 stars 4 forks source link

ModuleNotFoundError: No module named 'dart_id.fido' #2

Closed lgatto closed 5 years ago

lgatto commented 5 years ago

I would like to try dart_id out. I started by installing it with 

$ pip install git+https://github.com/SlavovLab/DART-ID --user

but hit the following error

$ dart_id -h                                                         
Traceback (most recent call last):
  File "/home/lgatto/.local/bin/dart_id", line 7, in <module>
    from dart_id.update import main
  File "/home/lgatto/.local/lib/python3.7/site-packages/dart_id/update.py", line 14, in <module>
    from dart_id.fido.BayesianNetwork import run_internal
ModuleNotFoundError: No module named 'dart_id.fido'

Any help appreciated.

atc3 commented 5 years ago

Hi,

I forgot to include the fido directory with the installation after a recent fix. The setup should now work. You can uninstall with:

pip uninstall dart_id

and reinstall:

pip install git+https://github.com/SlavovLab/DART-ID --user

Sorry for the issue, and let me know if you run into any additional problems.