Trouble after running make

My Issue

When I run the makefile I recieve the following error

-bash-4.2$ make Linking smilei ld: cannot find -lpython3.9 make: *** [smilei] Error 1

Not much help online on how to fix, so trying here. Shown required outputs below. I have loaded modules intel-suite, mpi, hdf5/1.10.1, anaconda3/personal as per my administrations instructions.

Any help would be appreciated, Thank you

Command outputs

Output of git describe --all --long -bash-4.2$ git describe --all --long heads/master-0-g0d47640

Output of make config=verbose -bash-4.2$ make config=verbose Linking smilei mpicxx build/src/Checkpoint/Checkpoint.o build/src/Collisions/CollisionalFusionDD.o build/src/Collisions/CollisionalNuclearReaction.o build/src/Collisions/CollisionalIonization.o build/src/Collisions/Collisions.o build/src/Collisions/CollisionsSingle.o build/src/Diagnostic/DiagnosticPerformances.o build/src/Diagnostic/DiagnosticScalar.o build/src/Diagnostic/DiagnosticParticleBinning.o build/src/Diagnostic/DiagnosticRadiationSpectrum.o build/src/Diagnostic/Histogram.o build/src/Diagnostic/DiagnosticFieldsAM.o build/src/Diagnostic/TimeSelection.o build/src/Diagnostic/DiagnosticFields3D.o build/src/Diagnostic/DiagnosticFields2D.o build/src/Diagnostic/DiagnosticParticleBinningBase.o build/src/Diagnostic/DiagnosticProbes.o build/src/Diagnostic/DiagnosticFields.o build/src/Diagnostic/DiagnosticFields1D.o build/src/Diagnostic/DiagnosticScreen.o build/src/Diagnostic/DiagnosticTrack.o build/src/DomainDecomposition/HilbertDomainDecomposition.o build/src/DomainDecomposition/Hilbert_functions.o build/src/DomainDecomposition/RegionDomainDecomposition.o build/src/DomainDecomposition/GlobalDomainDecomposition.o build/src/DomainDecomposition/LinearizedDomainDecomposition.o build/src/ElectroMagn/ElectroMagn1D.o build/src/ElectroMagn/Laser.o build/src/ElectroMagn/LaserEnvelope1D.o build/src/ElectroMagn/LaserEnvelopeAM.o build/src/ElectroMagn/ElectroMagn.o build/src/ElectroMagn/LaserPropagator.o build/src/ElectroMagn/LaserEnvelope3D.o build/src/ElectroMagn/ElectroMagn2D.o build/src/ElectroMagn/ElectroMagnAM.o build/src/ElectroMagn/LaserEnvelope.o build/src/ElectroMagn/LaserEnvelope2D.o build/src/ElectroMagn/ElectroMagn3D.o build/src/ElectroMagnBC/EnvelopeBC1D_refl.o build/src/ElectroMagnBC/EnvelopeBCAM_refl.o build/src/ElectroMagnBC/ElectroMagnBC.o build/src/ElectroMagnBC/ElectroMagnBC3D_SM.o build/src/ElectroMagnBC/ElectroMagnBC1D_refl.o build/src/ElectroMagnBC/ElectroMagnBC1D_SM.o build/src/ElectroMagnBC/ElectroMagnBC1D.o build/src/ElectroMagnBC/ElectroMagnBC3D.o build/src/ElectroMagnBC/ElectroMagnBCAM.o build/src/ElectroMagnBC/ElectroMagnBCAM_ramp.o build/src/ElectroMagnBC/ElectroMagnBC2D_Trans_Damping.o build/src/ElectroMagnBC/ElectroMagnBC2D.o build/src/ElectroMagnBC/EnvelopeBC3D_refl.o build/src/ElectroMagnBC/ElectroMagnBC3D_refl.o build/src/ElectroMagnBC/ElectroMagnBC2D_SM.o build/src/ElectroMagnBC/EnvelopeBC.o build/src/ElectroMagnBC/ElectroMagnBC3D_BM.o build/src/ElectroMagnBC/EnvelopeBC2D_refl.o build/src/ElectroMagnBC/ElectroMagnBC2D_refl.o build/src/ElectroMagnBC/ElectroMagnBCAM_SM.o build/src/ElectroMagnBC/ElectroMagnBCAM_BM.o build/src/ElectroMagnBC/EnvelopeBCAM_Axis.o build/src/ElectroMagnSolver/MF_Solver2D_Lehe.o build/src/ElectroMagnSolver/MA_SolverAM_norm.o build/src/ElectroMagnSolver/MF_Solver2D_Bouchard.o build/src/ElectroMagnSolver/MF_Solver3D_Yee.o build/src/ElectroMagnSolver/PXR_SolverAM_GPSTD.o build/src/ElectroMagnSolver/MA_Solver3D_norm.o build/src/ElectroMagnSolver/MF_Solver3D_Lehe.o build/src/ElectroMagnSolver/MF_Solver2D_GrassiSpL.o build/src/ElectroMagnSolver/PXR_Solver3D_FDTD.o build/src/ElectroMagnSolver/MF_Solver2D_Grassi.o build/src/ElectroMagnSolver/MF_Solver3D_Bouchard.o build/src/ElectroMagnSolver/MF_SolverAM_Yee.o build/src/ElectroMagnSolver/PXR_Solver3D_GPSTD.o build/src/ElectroMagnSolver/MF_Solver1D_Yee.o build/src/ElectroMagnSolver/PXR_Solver2D_GPSTD.o build/src/ElectroMagnSolver/MF_Solver2D_Yee.o build/src/ElectroMagnSolver/MA_Solver2D_Friedman.o build/src/ElectroMagnSolver/MF_Solver2D_Cowan.o build/src/ElectroMagnSolver/MA_Solver1D_norm.o build/src/ElectroMagnSolver/MA_Solver2D_norm.o build/src/Field/Field1D.o build/src/Field/Field3D.o build/src/Field/Field2D.o build/src/Field/cField3D.o build/src/Field/cField2D.o build/src/Field/cField1D.o build/src/Interpolator/Interpolator3D2OrderV.o build/src/Interpolator/Interpolator3D.o build/src/Interpolator/InterpolatorAM2Order.o build/src/Interpolator/Interpolator2D2Order.o build/src/Interpolator/Interpolator3D2Order.o build/src/Interpolator/Interpolator1D.o build/src/Interpolator/Interpolator2D4Order.o build/src/Interpolator/Interpolator1D3Order.o build/src/Interpolator/Interpolator1D2Order.o build/src/Interpolator/Interpolator2D2OrderV.o build/src/Interpolator/InterpolatorAM.o build/src/Interpolator/Interpolator.o build/src/Interpolator/InterpolatorAM1Order.o build/src/Interpolator/Interpolator3D4OrderV.o build/src/Interpolator/Interpolator1D4Order.o build/src/Interpolator/Interpolator3D4Order.o build/src/Interpolator/Interpolator2D.o build/src/Ionization/IonizationFromRate.o build/src/Ionization/IonizationTunnelEnvelopeAveraged.o build/src/Ionization/Ionization.o build/src/Ionization/IonizationTables.o build/src/Ionization/IonizationTunnel.o build/src/Merging/Merging.o build/src/Merging/MergingVranicCartesian.o build/src/Merging/MergingVranicSpherical.o build/src/MovWindow/SimWindow.o build/src/MultiphotonBreitWheeler/MultiphotonBreitWheelerTablesDefault.o build/src/MultiphotonBreitWheeler/MultiphotonBreitWheeler.o build/src/MultiphotonBreitWheeler/MultiphotonBreitWheelerTables.o build/src/Params/Params.o build/src/Params/PeekAtSpecies.o build/src/Params/OpenPMDparams.o build/src/ParticleBC/PartWall.o build/src/ParticleBC/PartBoundCond.o build/src/ParticleBC/BoundaryConditionType.o build/src/ParticleInjector/ParticleInjector.o build/src/Particles/ParticleCreator.o build/src/Particles/Particles.o build/src/Particles/Particle.o build/src/Patch/Region.o build/src/Patch/DoubleGrids.o build/src/Patch/DoubleGridsAM.o build/src/Patch/Patch.o build/src/Patch/PatchAM.o build/src/Patch/SyncVectorPatch.o build/src/Patch/Patch2D.o build/src/Patch/Patch3D.o build/src/Patch/Patch1D.o build/src/Patch/VectorPatch.o build/src/picsar_interface/interface.o build/src/Profiles/Profile.o build/src/Profiles/Function.o build/src/Projector/Projector3D.o build/src/Projector/ProjectorAM1Order.o build/src/Projector/ProjectorAM.o build/src/Projector/Projector3D4OrderV.o build/src/Projector/Projector1D4Order.o build/src/Projector/Projector3D2OrderGPU.o build/src/Projector/ProjectorAM2Order.o build/src/Projector/Projector.o build/src/Projector/Projector2D4Order.o build/src/Projector/Projector1D2Order.o build/src/Projector/Projector1D.o build/src/Projector/Projector3D4Order.o build/src/Projector/Projector2D2OrderV.o build/src/Projector/Projector3D2OrderV.o build/src/Projector/Projector2D.o build/src/Projector/Projector3D2Order.o build/src/Projector/Projector2D2Order.o build/src/Pusher/PusherVay.o build/src/Pusher/PusherPonderomotiveBoris.o build/src/Pusher/PusherBoris.o build/src/Pusher/Pusher.o build/src/Pusher/PusherPhoton.o build/src/Pusher/PusherHigueraCary.o build/src/Pusher/PusherBorisNR.o build/src/Pusher/PusherPonderomotivePositionBoris.o build/src/Radiation/RadiationLandauLifshitz.o build/src/Radiation/RadiationTools.o build/src/Radiation/RadiationTablesDefault.o build/src/Radiation/RadiationNiel.o build/src/Radiation/RadiationCorrLandauLifshitz.o build/src/Radiation/Radiation.o build/src/Radiation/RadiationDiagRadiationSpectrum.o build/src/Radiation/RadiationMonteCarlo.o build/src/Radiation/RadiationTables.o build/src/Smilei.o build/src/SmileiMPI/SmileiMPI_test.o build/src/SmileiMPI/SmileiMPI.o build/src/SmileiMPI/AsyncMPIbuffers.o build/src/Species/SpeciesV.o build/src/Species/SpeciesVAdaptive.o build/src/Species/SpeciesVAdaptiveMixedSort.o build/src/Species/SpeciesMetrics.o build/src/Species/Species.o build/src/Tools/tabulatedFunctions.o build/src/Tools/PyTools.o build/src/Tools/backward.o build/src/Tools/Timer.o build/src/Tools/Timers.o build/src/Tools/userFunctions.o build/src/Tools/Tools.o build/src/Tools/H5.o -o build/smilei -L/apps/hdf5/1.10.1//lib -lhdf5 -L/rds/general/user/in221/home/anaconda3/lib/python3.9/config-3.9-x86_64-linux-gnu -lpython3.9 -lcrypt -lpthread -ldl -lutil -lm -lm -Xlinker -export-dynamic -lm -fopenmp -D_OMP ld: cannot find -lpython3.9 make: *** [smilei] Error 1

Output of make env -bash-4.2$ make env VERSION : 4.6-238-g0d47640-master SMILEICXX : mpicxx OPENMP_FLAG : -fopenmp -D_OMP HDF5_ROOT_DIR : /apps/hdf5/1.10.1/ FFTW3_LIB_DIR : SITEDIR : /rds/general/user/in221/home/.local/lib/python3.9/site-packages PYTHONEXE : python PY_CXXFLAGS : -I/rds/general/user/in221/home/anaconda3/include/python3.9 -I/rds/general/user/in221/home/anaconda3/include/python3.9 -I/rds/general/user/in221/home/anaconda3/lib/python3.9/site-packages/numpy/core/include -DSMILEI_USE_NUMPY -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION PY_LDFLAGS : -L/rds/general/user/in221/home/anaconda3/lib/python3.9/config-3.9-x86_64-linux-gnu -lpython3.9 -lcrypt -lpthread -ldl -lutil -lm -lm -Xlinker -export-dynamic CXXFLAGS : -D__VERSION=\"4.6-238-g0d47640-master\" -D_VECTO -std=c++11 -Wall -I/apps/hdf5/1.10.1//include -Isrc -Isrc/Params -Isrc/ElectroMagnSolver -Isrc/ElectroMagn -Isrc/ElectroMagnBC -Isrc/Particles -Isrc/Radiation -Isrc/Ionization -Isrc/Interpolator -Isrc/Collisions -Isrc/Merging -Isrc/Tools -Isrc/Python -Isrc/Projector -Isrc/DomainDecomposition -Isrc/MovWindow -Isrc/Profiles -Isrc/picsar_interface -Isrc/Checkpoint -Isrc/Pusher -Isrc/Field -Isrc/ParticleBC -Isrc/MultiphotonBreitWheeler -Isrc/SmileiMPI -Isrc/Species -Isrc/Diagnostic -Isrc/ParticleInjector -Isrc/Patch -Ibuild/src/Python -I/rds/general/user/in221/home/anaconda3/include/python3.9 -I/rds/general/user/in221/home/anaconda3/include/python3.9 -I/rds/general/user/in221/home/anaconda3/lib/python3.9/site-packages/numpy/core/include -DSMILEI_USE_NUMPY -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -O3 -g -fopenmp -D_OMP LDFLAGS : -L/apps/hdf5/1.10.1//lib -lhdf5 -L/rds/general/user/in221/home/anaconda3/lib/python3.9/config-3.9-x86_64-linux-gnu -lpython3.9 -lcrypt -lpthread -ldl -lutil -lm -lm -Xlinker -export-dynamic -lm -fopenmp -D_OMP

Output of echo $LD_LIBRARY_PATH -bash-4.2$ echo $LD_LIBRARY_PATH -bash-4.2$ echo $LD_LIBRARY_PATH /apps/hdf5/1.10.5/lib:/apps/intel/2019.4/compilers_and_libraries_2019.4.243/linux/mkl/lib:/apps/intel/2019.4/compilers_and_libraries_2019.4.243/linux/compiler/lib/intel64/:/apps/hdf5/1.10.1/lib:/apps/mpi/intel/2019.6.166//libfabric/lib:/apps/mpi/intel/2019.6.166/lib/release:/apps/mpi/intel/2019.6.166/lib:/apps/intel/2017.6/advisor_2017.1.5.527008/include/intel64:/apps/intel/2017.6/clck/2017.2.019/libexec/intel64:/apps/intel/2017.6/clck/2017.2.019/lib/intel64:/apps/intel/2017.6/clck/2017.2.019/provider/share/offload_phi/intel64:/apps/intel/2017.6/clck/2017.2.019/provider/share/dgemm/intel64:/apps/intel/2017.6/clck/2017.2.019/provider/share/iozone/intel64:/apps/intel/2017.6/clck/2017.2.019/provider/share/common/lib/intel64:/apps/intel/2017.6/clck/2017.2.019/provider/share/common/bin/intel64:/apps/intel/2017.6/clck/2017.2.019/provider/share/stream/intel64:/apps/intel/2017.6/clck/2017.2.019/connector/intel64:/apps/intel/2017.6/clck/2017.2.019/bin/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/ipp/lib/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/ipp/tools/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/mkl/lib/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/mkl/benchmarks/hpcg/bin/lib/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/mkl/include/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/daal/lib/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/compiler/lib/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/compiler/include/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/tbb/lib/intel64:/apps/intel/2017.6/compilers_and_libraries_2017.6.256/linux/bin/intel64:/apps/intel/2017.6/inspector_2017.1.4.527006/include/intel64:/apps/intel/2017.6/itac/2017.4.034/intel64:/apps/intel/2017.6/compilers_and_libraries_2017/linux/bin/intel64:/apps/intel/2017.6/debugger_2017/libipt/intel64:/apps/intel/2017.6/debugger_2017/python/intel64:/apps/intel/2017.6/debugger_2017/gdb/targets/intel64:/apps/intel/2017.6/debugger_2017/gdb/intel64:/apps/intel/2017.6/vtune_amplifier_xe_2017.5.0.526192/include/intel64

Output of python -m sysconfig -bash-4.2$ python -m sysconfig Platform: "linux-x86_64" Python version: "3.9" Current installation scheme: "posix_prefix"

Paths: data = "/rds/general/user/in221/home/anaconda3" include = "/rds/general/user/in221/home/anaconda3/include/python3.9" platinclude = "/rds/general/user/in221/home/anaconda3/include/python3.9" platlib = "/rds/general/user/in221/home/anaconda3/lib/python3.9/site-packages" platstdlib = "/rds/general/user/in221/home/anaconda3/lib/python3.9" purelib = "/rds/general/user/in221/home/anaconda3/lib/python3.9/site-packages" scripts = "/rds/general/user/in221/home/anaconda3/bin" stdlib = "/rds/general/user/in221/home/anaconda3/lib/python3.9"

Variables: ABIFLAGS = "" AC_APPLE_UNIVERSAL_BUILD = "0" AIX_BUILDDATE = "0" AIX_GENUINE_CPLUSPLUS = "0" ALT_SOABI = "0" ANDROID_API_LEVEL = "0" AR = "ar" ARFLAGS = "rcs" BASECFLAGS = "-Wno-unused-result -Wsign-compare" BASECPPFLAGS = "-IObjects -IInclude -IPython" BASEMODLIBS = "" BINDIR = "/rds/general/user/in221/home/anaconda3/bin" BINLIBDEST = "/rds/general/user/in221/home/anaconda3/lib/python3.9" BLDLIBRARY = "libpython3.9.a" BLDSHARED = "gcc -pthread -B /rds/general/user/in221/home/anaconda3/compiler_compat -Wl,--sysroot=/ -shared -Wl,-rpath,/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath-link,/rds/general/user/in221/home/anaconda3/lib -L/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath,/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath-link,/rds/general/user/in221/home/anaconda3/lib -L/rds/general/user/in221/home/anaconda3/lib" BUILDEXE = "" BUILDPYTHON = "python" BUILD_GNU_TYPE = "x86_64-conda_cos6-linux-gnu" BYTESTR_DEPS = "\" CC = "gcc -pthread -B /rds/general/user/in221/home/anaconda3/compiler_compat -Wl,--sysroot=/" CCSHARED = "-fPIC" CFLAGS = "-Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include " CFLAGSFORSHARED = "" CFLAGS_ALIASING = "" CONFIGFILES = "configure configure.ac acconfig.h pyconfig.h.in Makefile.pre.in" CONFIGURE_CFLAGS = " -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include " CONFIGURE_CFLAGS_NODIST = " -g -std=c99 -Wextra -Wno-unused-result -Wno-unused-parameter -Wno-missing-field-initializers -Werror=implicit-function-declaration -fvisibility=hidden" CONFIGURE_CPPFLAGS = "-DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include" CONFIGURE_LDFLAGS = "-Wl,-rpath,/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath-link,/rds/general/user/in221/home/anaconda3/lib -L/rds/general/user/in221/home/anaconda3/lib" CONFIGURE_LDFLAGS_NODIST = " -g" CONFIG_ARGS = "'--prefix=/rds/general/user/in221/home/anaconda3' '--build=x86_64-conda_cos6-linux-gnu' '--host=x86_64-conda_cos6-linux-gnu''--enable-ipv6' '--with-ensurepip=no' '--with-tzpath=/rds/general/user/in221/home/anaconda3/share/zoneinfo:/rds/general/user/in221/home/anaconda3/share/tzinfo' '--with-computed-gotos''--with-system-ffi' '--enable-loadable-sqlite-extensions' '--with-tcltk-includes=-I/rds/general/user/in221/home/anaconda3/include' '--with-tcltk-libs=-L/rds/general/user/in221/home/anaconda3/lib -ltcl8.6 -ltk8.6''--with-platlibdir=lib''--with-lto' '--enable-optimizations' '-oldincludedir=/usr/include' '--disable-shared''PROFILE_TASK=-m test --pgo' 'build_alias=x86_64-conda_cos6-linux-gnu' 'host_alias=x86_64-conda_cos6-linux-gnu''MACHDEP=linux' 'CC= gcc''CFLAGS= -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include ''LDFLAGS= -Wl,-rpath,/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath-link,/rds/general/user/in221/home/anaconda3/lib -L/rds/general/user/in221/home/anaconda3/lib' 'CPPFLAGS=-DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include' 'CPP=/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/_build_env/bin/cpp' 'PKG_CONFIG_PATH=/rds/general/user/in221/home/anaconda3/lib/pkgconfig'" CONFINCLUDEDIR = "/rds/general/user/in221/home/anaconda3/include" CONFINCLUDEPY = "/rds/general/user/in221/home/anaconda3/include/python3.9" COREPYTHONPATH = "" COVERAGE_INFO = "/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/build-static/coverage.info" COVERAGE_REPORT = "/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/build-static/lcov-report" COVERAGE_REPORT_OPTIONS = "--no-branch-coverage --title "CPython lcov report"" CPPFLAGS = "-IObjects -IInclude -IPython -I. -I/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include" CXX = "g++ -pthread -B /rds/general/user/in221/home/anaconda3/compiler_compat -Wl,--sysroot=/" DESTDIRS = "/rds/general/user/in221/home/anaconda3 /rds/general/user/in221/home/anaconda3/lib /rds/general/user/in221/home/anaconda3/lib/python3.9 /rds/general/user/in221/home/anaconda3/lib/python3.9/lib-dynload" DESTLIB = "/rds/general/user/in221/home/anaconda3/lib/python3.9" DESTPATH = "" DESTSHARED = "/rds/general/user/in221/home/anaconda3/lib/python3.9/lib-dynload" DFLAGS = "" DIRMODE = "755" DIST = "README.rst ChangeLog configure configure.ac acconfig.h pyconfig.h.in Makefile.pre.in Include Lib Misc Ext-dummy" DISTDIRS = "Include Lib Misc Ext-dummy" DISTFILES = "README.rst ChangeLog configure configure.ac acconfig.h pyconfig.h.in Makefile.pre.in" DLINCLDIR = "." 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LIBPC = "/rds/general/user/in221/home/anaconda3/lib/pkgconfig" LIBPL = "/rds/general/user/in221/home/anaconda3/lib/python3.9/config-3.9-x86_64-linux-gnu" LIBPYTHON = "" LIBRARY = "libpython3.9.a" LIBRARY_OBJS = "\" LIBRARY_OBJS_OMIT_FROZEN = "\" LIBS = "-lcrypt -lpthread -ldl -lutil -lm" LIBSUBDIRS = "tkinter tkinter/test tkinter/test/test_tkinter \" LINKCC = "gcc -pthread -B /rds/general/user/in221/home/anaconda3/compiler_compat -Wl,--sysroot=/" LINKFORSHARED = "-Xlinker -export-dynamic" LIPO_32BIT_FLAGS = "" LIPO_INTEL64_FLAGS = "" LLVM_PROF_ERR = "no" LLVM_PROF_FILE = "" LLVM_PROF_MERGER = "true" LN = "ln" LOCALMODLIBS = "" MACHDEP = "linux" MACHDEP_OBJS = "" MACHDESTLIB = "/rds/general/user/in221/home/anaconda3/lib/python3.9" MACOSX_DEPLOYMENT_TARGET = "" MAINCC = "gcc -pthread -B /rds/general/user/in221/home/anaconda3/compiler_compat -Wl,--sysroot=/" MAJOR_IN_MKDEV = "0" MAJOR_IN_SYSMACROS = "0" MAKESETUP = "/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Modules/makesetup" MANDIR = "/rds/general/user/in221/home/anaconda3/share/man" MKDIR_P = "/bin/mkdir -p" MODBUILT_NAMES = "posix errno pwd _sre _codecs _weakref _functools _operator _collections _abc itertools atexit _signal _stat time _thread _locale _io faulthandler _tracemalloc _peg_parser _symtable xxsubtype" MODDISABLED_NAMES = "" MODLIBS = "" MODOBJS = "Modules/posixmodule.o Modules/errnomodule.o Modules/pwdmodule.o Modules/_sre.o Modules/_codecsmodule.o Modules/_weakref.o Modules/_functoolsmodule.o Modules/_operator.o Modules/_collectionsmodule.o Modules/_abc.o Modules/itertoolsmodule.o Modules/atexitmodule.o Modules/signalmodule.o Modules/_stat.o Modules/timemodule.o Modules/_threadmodule.o Modules/_localemodule.o Modules/_iomodule.o Modules/iobase.o Modules/fileio.o Modules/bytesio.o Modules/bufferedio.o Modules/textio.o Modules/stringio.o Modules/faulthandler.o Modules/_tracemalloc.o Modules/_peg_parser.o Modules/symtablemodule.o Modules/xxsubtype.o" MODULE_OBJS = "\" MULTIARCH = "x86_64-linux-gnu" MULTIARCH_CPPFLAGS = "-DMULTIARCH=\"x86_64-linux-gnu\"" MVWDELCH_IS_EXPRESSION = "1" NO_AS_NEEDED = "-Wl,--no-as-needed" OBJECT_OBJS = "\" OPENSSL_INCLUDES = "-I/rds/general/user/in221/home/anaconda3/include" OPENSSL_LDFLAGS = "-L/rds/general/user/in221/home/anaconda3/lib" OPENSSL_LIBS = "-lssl -lcrypto" OPT = "-DNDEBUG -O2 -Wall" OTHER_LIBTOOL_OPT = "" PACKAGE_BUGREPORT = "0" PACKAGE_NAME = "0" PACKAGE_STRING = "0" PACKAGE_TARNAME = "0" PACKAGE_URL = "0" PACKAGE_VERSION = "0" PARSER_HEADERS = "\" PARSER_OBJS = "\ \ Parser/myreadline.o Parser/parsetok.o Parser/tokenizer.o" PEGEN_HEADERS = "\" PEGEN_OBJS = "\" PGO_PROF_GEN_FLAG = "-fprofile-generate" PGO_PROF_USE_FLAG = "" PLATLIBDIR = "lib" POBJS = "\" POSIX_SEMAPHORES_NOT_ENABLED = "0" PROFILE_TASK = "-m test --pgo" PTHREAD_KEY_T_IS_COMPATIBLE_WITH_INT = "1" PTHREAD_SYSTEM_SCHED_SUPPORTED = "1" PURIFY = "" PY3LIBRARY = "" PYLONG_BITS_IN_DIGIT = "0" PYTHON = "python" PYTHONFRAMEWORK = "" PYTHONFRAMEWORKDIR = "no-framework" PYTHONFRAMEWORKINSTALLDIR = "" PYTHONFRAMEWORKPREFIX = "" PYTHONPATH = "" PYTHON_FOR_BUILD = "./python -E" PYTHON_HEADERS = "\" PYTHON_OBJS = "\" PY_BUILD_ENVIRON = "" PY_BUILTIN_HASHLIB_HASHES = ""md5,sha1,sha256,sha512,sha3,blake2"" PY_BUILTIN_MODULE_CFLAGS = "-Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include -g -std=c99 -Wextra -Wno-unused-result -Wno-unused-parameter -Wno-missing-field-initializers -Werror=implicit-function-declaration -fvisibility=hidden -I/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Include/internal -IObjects -IInclude -IPython -I. -I/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include -DPy_BUILD_CORE_BUILTIN" PY_CFLAGS = "-Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include " PY_CFLAGS_NODIST = " -g -std=c99 -Wextra -Wno-unused-result -Wno-unused-parameter -Wno-missing-field-initializers -Werror=implicit-function-declaration -fvisibility=hidden -I/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Include/internal" PY_COERCE_C_LOCALE = "1" PY_CORE_CFLAGS = "-Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include -g -std=c99 -Wextra -Wno-unused-result -Wno-unused-parameter -Wno-missing-field-initializers -Werror=implicit-function-declaration -fvisibility=hidden -I/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Include/internal -IObjects -IInclude -IPython -I. -I/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include -DPy_BUILD_CORE" PY_CORE_LDFLAGS = "-Wl,-rpath,/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath-link,/rds/general/user/in221/home/anaconda3/lib -L/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath,/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath-link,/rds/general/user/in221/home/anaconda3/lib -L/rds/general/user/in221/home/anaconda3/lib -g" PY_CPPFLAGS = "-IObjects -IInclude -IPython -I. -I/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include" PY_FORMAT_SIZE_T = ""z"" PY_LDFLAGS = "-Wl,-rpath,/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath-link,/rds/general/user/in221/home/anaconda3/lib -L/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath,/rds/general/user/in221/home/anaconda3/lib -Wl,-rpath-link,/rds/general/user/in221/home/anaconda3/lib -L/rds/general/user/in221/home/anaconda3/lib" PY_LDFLAGS_NODIST = " -g" PY_SSL_DEFAULT_CIPHERS = "1" PY_SSL_DEFAULT_CIPHER_STRING = "0" PY_STDMODULE_CFLAGS = "-Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include -fPIC -O2 -isystem /rds/general/user/in221/home/anaconda3/include -g -std=c99 -Wextra -Wno-unused-result -Wno-unused-parameter -Wno-missing-field-initializers -Werror=implicit-function-declaration -fvisibility=hidden -I/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Include/internal -IObjects -IInclude -IPython -I. -I/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /rds/general/user/in221/home/anaconda3/include -I/rds/general/user/in221/home/anaconda3/include" Py_DEBUG = "0" Py_ENABLE_SHARED = "0" Py_HASH_ALGORITHM = "0" Py_TRACE_REFS = "0" QUICKTESTOPTS = "-x test_subprocess test_io test_lib2to3 \" READELF = "readelf" RESSRCDIR = "Mac/Resources/framework" RETSIGTYPE = "void" RUNSHARED = "" SCRIPTDIR = "/rds/general/user/in221/home/anaconda3/lib" SETPGRP_HAVE_ARG = "0" SGI_ABI = "" SHELL = "/bin/sh" SHLIBS = "-lcrypt -lpthread -ldl -lutil -lm" SHLIB_SUFFIX = ".so" SHM_NEEDS_LIBRT = "1" SIGNED_RIGHT_SHIFT_ZERO_FILLS = "0" SITEPATH = "" SIZEOF_DOUBLE = "8" SIZEOF_FLOAT = "4" SIZEOF_FPOS_T = "16" SIZEOF_INT = "4" SIZEOF_LONG = "8" SIZEOF_LONG_DOUBLE = "16" SIZEOF_LONG_LONG = "8" SIZEOF_OFF_T = "8" SIZEOF_PID_T = "4" SIZEOF_PTHREAD_KEY_T = "4" SIZEOF_PTHREAD_T = "8" SIZEOF_SHORT = "2" SIZEOF_SIZE_T = "8" SIZEOF_TIME_T = "8" SIZEOF_UINTPTR_T = "8" SIZEOF_VOID_P = "8" SIZEOF_WCHAR_T = "4" SIZEOFBOOL = "1" SO = ".cpython-39-x86_64-linux-gnu.so" SOABI = "cpython-39-x86_64-linux-gnu" SRCDIRS = "Parser Parser/pegen Objects Python Modules Modules/_io Programs" SRC_GDB_HOOKS = "/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Tools/gdb/libpython.py" STDC_HEADERS = "1" STRICT_SYSV_CURSES = "/ Don't use ncurses extensions /" STRIPFLAG = "-s" SUBDIRS = "" SUBDIRSTOO = "Include Lib Misc" SYSLIBS = "-lm" SYS_SELECT_WITH_SYS_TIME = "1" TCLTK_INCLUDES = "-I/rds/general/user/in221/home/anaconda3/include" TCLTK_LIBS = "-L/rds/general/user/in221/home/anaconda3/lib -ltcl8.6 -ltk8.6" TESTOPTS = "" TESTPATH = "" TESTPYTHON = "./python" TESTPYTHONOPTS = "" TESTRUNNER = "./python /home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Tools/scripts/run_tests.py" TESTTIMEOUT = "1200" TIMEMODULE_LIB = "0" TIME_WITH_SYS_TIME = "1" TM_IN_SYS_TIME = "0" TZPATH = "/rds/general/user/in221/home/anaconda3/share/zoneinfo:/rds/general/user/in221/home/anaconda3/share/tzinfo" UNICODE_DEPS = "\" UNIVERSALSDK = "" UPDATE_FILE = "python3 /home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/Tools/scripts/update_file.py" USE_COMPUTED_GOTOS = "1" VERSION = "3.9" VPATH = "/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work" WINDOW_HAS_FLAGS = "1" WITH_DECIMAL_CONTEXTVAR = "1" WITH_DOC_STRINGS = "1" WITH_DTRACE = "0" WITH_DYLD = "0" WITH_LIBINTL = "0" WITH_NEXT_FRAMEWORK = "0" WITH_PYMALLOC = "1" WITH_VALGRIND = "0" X87_DOUBLE_ROUNDING = "0" XMLLIBSUBDIRS = "xml xml/dom xml/etree xml/parsers xml/sax" abiflags = "" abs_builddir = "/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work/build-static" abs_srcdir = "/home/builder/ktietz/cos6/ci_cos6/python-split_1622827272909/work" base = "/rds/general/user/in221/home/anaconda3" datarootdir = "/rds/general/user/in221/home/anaconda3/share" exec_prefix = "/rds/general/user/in221/home/anaconda3" installed_base = "/rds/general/user/in221/home/anaconda3" installed_platbase = "/rds/general/user/in221/home/anaconda3" platbase = "/rds/general/user/in221/home/anaconda3" platlibdir = "lib" prefix = "/rds/general/user/in221/home/anaconda3" projectbase = "/rds/general/user/in221/home/anaconda3/bin" py_version = "3.9.5" py_version_nodot = "39" py_version_short = "3.9" srcdir = "/rds/general/user/in221/home/anaconda3/lib/python3.9/config-3.9-x86_64-linux-gnu" userbase = "/rds/general/user/in221/home/.local"

Output of ldd smilei -bash-4.2$ ldd smilei ldd: ./smilei: No such file or directory

SmileiPIC / Smilei

Trouble after running make #431

My Issue

Command outputs