Robust status handling and per-rule config - Githubissues

Snakemake-Profiles / lsf

Snakemake profile for running jobs on an LSF cluster

MIT License

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Robust status handling and per-rule config #16

Closed mbhall88 closed 4 years ago

mbhall88 commented 4 years ago

This PR is much bigger than I would normally like. In a way, we can think of this as a "release".

Added:

Look at the log file if bsub returns an empty job status. See #5 for more information.
Allow specifying per-rule cluster resource settings (similar to deprecated cluster config). See #15 and #7 for more information.
Added a CONTRIBUTING.md document [#15]
TESTS!! A big thanks to @leoisl for getting this off the ground. See #12 for a request to add him to the repository as a contributor.
Add CHANGELOG to track major changes.

Updated:

The naming of log files. See #14 and #15 for more information.
Robust memory handling [#18 and #20]
README is now much more thorough [#15]