Snakemake-Profiles / lsf

Snakemake profile for running jobs on an LSF cluster
MIT License
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Better handling of group jobs #23

Closed mbhall88 closed 4 years ago

mbhall88 commented 4 years ago

This PR closes #19

We were casting job IDs to int when, in the case of group jobs, their ID is actually a UUID. I have changed this behaviour to return a str from the job ID method and also added 100% test coverage of all methods relating to group jobs.

I have also tested this out on my cluster with a minimal group example taken from the docs.