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Snakemake-Profiles / lsf

Snakemake profile for running jobs on an LSF cluster
MIT License
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Error with Line 207 on lsf_status.py #54

Closed shalabhsuman closed 2 years ago

shalabhsuman commented 2 years ago

I am receving the following error:

Resuming incomplete job 9 with external jobid '3.8.13 | packaged by conda-forge | (default, Mar 25 2022, 06:04:10) '.
Traceback (most recent call last):
  File ".config/snakemake/lsf/lsf_status.py", line 207, in <module>
    jobid = int(split_args[0])
ValueError: invalid literal for int() with base 10: '3.8.13'
WorkflowError:
Failed to obtain job status. See above for error message.
Shutting down, this might take some time.
Exiting because a job execution failed. Look above for error message
Complete log: .snakemake/log/2022-05-04T193619.896311.snakemake.log

SnakeMake version: 7.5.0

It can be related to issue #45

shalabhsuman commented 2 years ago

was able to resolve it!