Add option to filter SNPs by SnpEff predicted impact

Snitkin-Lab-Umich / prewas

R package to perform data pre-processing for more informative bacterial GWAS

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Closed zenalapp closed 4 years ago

zenalapp commented 4 years ago

e.g. to collapse only predicted high & moderate impact variants into genes (excluding low impact variants)

zenalapp commented 4 years ago

Added by @sthiede