Improved package vignette (Getting Started) for pkgdown - Githubissues

SomaLogic / SomaPlotr

A highly specialized suite of standardized plotting routines based on the "Grammar of Graphics" framework of mapping variables to aesthetics used in 'ggplot2'. Graphics types are biased towards visualizing SomaScan (proteomic) data.

https://somalogic.github.io/SomaPlotr/

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Improved package vignette (Getting Started) for pkgdown #3

Closed stufield closed 1 year ago

stufield commented 1 year ago

SomaPlotr.Rmd vignette cleanup and improvement
word smithing and re-creating of example to better showcase the functionality in relation to "real" SomaScan
setting seeds to reproduct and generate "realistic" data
use more log10() data in examples
fixes #2 and #6

Change type

Please check the relevant box(es):

[ ] New feature (no API change; @amanda-hi, @stufield)
[ ] Bug fix (no API change -> fixes an issue; @amanda-hi, @stufield)
[ ] Breaking change (fix or feature with API change; @amanda-hi, @stufield)
[ ] Documentation update (@SLbmangum, @kmurugesan14)
[ ] Package maintenance (structural, non-code, non-breaking changes; @stufield)
[ ] README change (@SLbmangum, @kmurugesan14, @nmcnabbSL)
[ ] LICENSE changes (@SLbmangum)

Choose reviewer(s)

[x] @amanda-hi
[ ] @stufield
[ ] @SLbmangum
[ ] @kmurugesan14
[ ] @nmcnabbSL

stufield commented 1 year ago

This PR will run cleanly once the unit tests for plotConcord() are fixed.