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SomaLogic
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SomaPlotr
A highly specialized suite of standardized plotting routines based on the "Grammar of Graphics" framework of mapping variables to aesthetics used in 'ggplot2'. Graphics types are biased towards visualizing SomaScan (proteomic) data.
https://somalogic.github.io/SomaPlotr/
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Clean up params for `plotVolcanoHTML()`
#8
Closed
stufield
closed
1 year ago
stufield
commented
1 year ago
currently the arguments do not match
plotVolcano()
uses the
stat_table
method; which we may not want to expose
uses
target.label
as opposed to
label
as in
plotVolcano()
remove the signed.log2.fold.change
,
p.value` defaults as they are internal only defaults
clean up for consistency
plotVolcano()
stat_table
method; which we may not want to exposetarget.label
as opposed tolabel
as inplotVolcano()
,
p.value` defaults as they are internal only defaults