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SorenKarst
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longread_umi
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Pipeline streamlining and improvements
#15
Closed
SorenKarst
closed
4 years ago
SorenKarst
commented
4 years ago
Improvements
Pipeline tools accessed through an initiation script.
Tools more streamlined.
Access to more settings allows the pipeline to work on custom libraries.
PacBio pipeline.
Name formating improved.
Medaka processing optimized.
UMI binning improved to utilize more data.
Added barcode demultiplexing.
Fixes
Fixes #8 ValueError found when run test_read.fq
Improvements
Fixes