I installed the software in an anaconda environment under a directory named "installdir". The longreadumi.sh script mechanism that finds the pipelines removes any line with the string "install" in it, so none of the pipelines were visible! I changed the pattern to "install" and that fixed the problem on my system. I wonder if a better mechanism might be:
find $LONGREAD_UMIPATH/scripts -name "*.sh" -print | sed -e '/install[a-z]*.sh/d' ...
I installed the software in an anaconda environment under a directory named "installdir". The longreadumi.sh script mechanism that finds the pipelines removes any line with the string "install" in it, so none of the pipelines were visible! I changed the pattern to "install" and that fixed the problem on my system. I wonder if a better mechanism might be:
find $LONGREAD_UMIPATH/scripts -name "*.sh" -print | sed -e '/install[a-z]*.sh/d' ...