hmmer-deploy/ARCH=x86_64,NAME=hmmer,OS=u1610,SITE=generic,VERSION=3.1b2 #1 failed

[jenkinsSAGrid]

Build 'hmmer-deploy/ARCH=x86_64,NAME=hmmer,OS=u1610,SITE=generic,VERSION=3.1b2' is failing!

Last 50 lines of build output:

[...truncated 141.22 KB...]
    exercise  255 [          brute-itest] ...     ok.
    exercise  256 [       hmmpress-itest] ...     ok.
    exercise  257 [                  h39] ...     ok.
    exercise  258 [                  h45] ...     ok.
    exercise  259 [                  h50] ...     ok.
    exercise  260 [                  h82] ...     ok.

All 260 exercises at level <= 2 passed.

System information:
Mon Jun 26 18:43:18 UTC 2017
Linux ubuntu1610-slave 3.10.0-514.6.1.el7.x86_64 #1 SMP Wed Jan 18 13:06:36 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux
make[1]: Leaving directory '/home/jenkins/workspace/hmmer-deploy/ARCH/x86_64/NAME/hmmer/OS/u1610/SITE/generic/VERSION/3.1b2/hmmer-3.1b2/build-1/testsuite'
0
/usr/bin/install -c -d /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/bin
/usr/bin/install -c -d /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/lib
/usr/bin/install -c -d /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/include
/usr/bin/install -c -d /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/share/man/man1
/usr/bin/install -c -d /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/share/doc/hmmer
     SUBDIR src
make[1]: Entering directory '/home/jenkins/workspace/hmmer-deploy/ARCH/x86_64/NAME/hmmer/OS/u1610/SITE/generic/VERSION/3.1b2/hmmer-3.1b2/build-1/src'
     SUBDIR impl_sse
make[2]: Entering directory '/home/jenkins/workspace/hmmer-deploy/ARCH/x86_64/NAME/hmmer/OS/u1610/SITE/generic/VERSION/3.1b2/hmmer-3.1b2/build-1/src/impl_sse'
for file in impl_sse.h; do \
   /usr/bin/install -c -m 0644 ../../../src/impl_sse/$file /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/include/ ;\
done
make[2]: Leaving directory '/home/jenkins/workspace/hmmer-deploy/ARCH/x86_64/NAME/hmmer/OS/u1610/SITE/generic/VERSION/3.1b2/hmmer-3.1b2/build-1/src/impl_sse'
for file in alimask hmmalign hmmbuild hmmconvert hmmemit hmmfetch hmmlogo hmmpress hmmscan hmmsearch hmmsim hmmstat jackhmmer phmmer nhmmer nhmmscan hmmpgmd hmmc2 makehmmerdb hmmerfm-exactmatch; do \
   /usr/bin/install -c -m 0755 $file /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/bin/ ;\
done
/usr/bin/install -c -m 0755 libhmmer.a /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/lib/
for file in hmmer.h cachedb.h p7_gbands.h p7_gmxb.h p7_gmxchk.h p7_hmmcache.h; do \
   /usr/bin/install -c -m 0644 ../../src/$file /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/include/ ;\
done
/usr/bin/install -c -m 0644 p7_config.h /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/include/ ;\

make[1]: Leaving directory '/home/jenkins/workspace/hmmer-deploy/ARCH/x86_64/NAME/hmmer/OS/u1610/SITE/generic/VERSION/3.1b2/hmmer-3.1b2/build-1/src'
     SUBDIR documentation
make[1]: Entering directory '/home/jenkins/workspace/hmmer-deploy/ARCH/x86_64/NAME/hmmer/OS/u1610/SITE/generic/VERSION/3.1b2/hmmer-3.1b2/build-1/documentation'
     SUBDIR man
make[2]: Entering directory '/home/jenkins/workspace/hmmer-deploy/ARCH/x86_64/NAME/hmmer/OS/u1610/SITE/generic/VERSION/3.1b2/hmmer-3.1b2/build-1/documentation/man'
for file in hmmer hmmalign hmmbuild hmmconvert hmmemit hmmfetch hmmlogo hmmpgmd hmmpress hmmscan hmmsearch hmmsim hmmstat jackhmmer makehmmerdb phmmer nhmmer nhmmscan alimask; do \
   /usr/bin/install -c -m 0755 ../../../documentation/man/$file.man /data/ci-build/generic/u1610/x86_64/hmmer/3.1b2/share/man/man1/${file}.1 ;\
done
make[2]: Leaving directory '/home/jenkins/workspace/hmmer-deploy/ARCH/x86_64/NAME/hmmer/OS/u1610/SITE/generic/VERSION/3.1b2/hmmer-3.1b2/build-1/documentation/man'
make[1]: Leaving directory '/home/jenkins/workspace/hmmer-deploy/ARCH/x86_64/NAME/hmmer/OS/u1610/SITE/generic/VERSION/3.1b2/hmmer-3.1b2/build-1/documentation'
mkdir: cannot create directory '/hmmer': Permission denied
Build step 'Conditional step (single)' marked build as failure

Changes since last successful build:

View full output

[jenkinsSAGrid]

Build was fixed!