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SouthAfricaDigitalScience / suitesparse-deploy

A repo to contain the scripts and tests for suite sparse
Apache License 2.0
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suitesparse-deploy/ARCH=x86_64,GCC_VERSION=5.4.0,NAME=SuiteSparse,OPENMPI_VERSION=1.8.8,OS=centos7,SITE=generic,VERSION=4.5.5 #9 failed #40

Closed jenkinsSAGrid closed 7 years ago

jenkinsSAGrid commented 7 years ago

Build 'suitesparse-deploy/ARCH=x86_64,GCC_VERSION=5.4.0,NAME=SuiteSparse,OPENMPI_VERSION=1.8.8,OS=centos7,SITE=generic,VERSION=4.5.5' is failing!

Last 50 lines of build output:

Started by upstream project "suitesparse-deploy" build number 9
originally caused by:
 Started by GitHub push by brucellino
[EnvInject] - Loading node environment variables.
Building remotely on local-41c085dc48c9 (x86_64 centos7) in workspace /home/jenkins/workspace/suitesparse-deploy/ARCH/x86_64/GCC_VERSION/5.4.0/NAME/SuiteSparse/OPENMPI_VERSION/1.8.8/OS/centos7/SITE/generic/VERSION/4.5.5
Cloning the remote Git repository
Cloning repository https://github.com/SouthAfricaDigitalScience/suitesparse-deploy
 > git init /home/jenkins/workspace/suitesparse-deploy/ARCH/x86_64/GCC_VERSION/5.4.0/NAME/SuiteSparse/OPENMPI_VERSION/1.8.8/OS/centos7/SITE/generic/VERSION/4.5.5 # timeout=10
Fetching upstream changes from https://github.com/SouthAfricaDigitalScience/suitesparse-deploy
 > git --version # timeout=10
using GIT_ASKPASS to set credentials Jenkins Github token
 > git fetch --tags --progress https://github.com/SouthAfricaDigitalScience/suitesparse-deploy +refs/heads/*:refs/remotes/origin/*
 > git config remote.origin.url https://github.com/SouthAfricaDigitalScience/suitesparse-deploy # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/SouthAfricaDigitalScience/suitesparse-deploy # timeout=10
Fetching upstream changes from https://github.com/SouthAfricaDigitalScience/suitesparse-deploy
using GIT_ASKPASS to set credentials Jenkins Github token
 > git fetch --tags --progress https://github.com/SouthAfricaDigitalScience/suitesparse-deploy +refs/heads/*:refs/remotes/origin/*
Checking out Revision 65cd3cfcaeae88edd3cd65e4d2429cb0f72309df (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 65cd3cfcaeae88edd3cd65e4d2429cb0f72309df
First time build. Skipping changelog.
Run condition [Current build status] enabling prebuild for step [Execute shell]
Run condition [Current build status] enabling prebuild for step [Execute shell]
[Set GitHub commit status (universal)] PENDING on repos [GHRepository@7242a87c[description=A repo to contain the scripts and tests for suite sparse,homepage=<null>,name=suitesparse-deploy,license=<null>,fork=false,size=30,milestones={},language=Makefile,commits={},source=<null>,parent=<null>,url=https://api.github.com/repos/SouthAfricaDigitalScience/suitesparse-deploy,id=43899036]] (sha:65cd3cf) with context:suitesparse-deploy/ARCH=x86_64,GCC_VERSION=5.4.0,NAME=SuiteSparse,OPENMPI_VERSION=1.8.8,OS=centos7,SITE=generic,VERSION=4.5.5
Setting commit status on GitHub for https://github.com/SouthAfricaDigitalScience/suitesparse-deploy/commit/65cd3cfcaeae88edd3cd65e4d2429cb0f72309df
[4.5.5] $ /bin/sh -xe /tmp/hudson2373834146124898092.sh
+ ./build-centos7.sh
continuing from previous builds, using source at  /data/src/SuiteSparse/4.5.5/SuiteSparse-4.5.5.tar.gz
continuing from previous builds, using source at  /data/src/SuiteSparse/4.5.5/metis-4.0.3.tar.gz

gzip: stdin: unexpected end of file
tar: Unexpected EOF in archive
tar: Unexpected EOF in archive
tar: Error is not recoverable: exiting now
Build step 'Execute shell' marked build as failure

Changes since last successful build:

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brucellino commented 7 years ago

job is now failing in check-build.sh (since at least build 54 / 2854eddedce) with : 

/data/ci-build/generic/centos7/x86_64/gcc/6.3.0/bin/gcc -L/data/ci-build/generic/centos7/x86_64/gmp/6.1.0/lib -L/data/ci-build/generic/centos7/x86_64/SuiteSparse/4.5.5-mpi-1.8.8-gcc-6.3.0/lib -L/data/ci-build/generic/centos7/x86_64/SuiteSparse/4.5.5-mpi-1.8.8-gcc-6.3.0/lib -L/data/ci-build/generic/centos7/x86_64/SuiteSparse/4.5.5-mpi-1.8.8-gcc-6.3.0/lib -shared -Wl,-soname -Wl,libcholmod.so.3 -Wl,--no-undefined -fopenmp cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_ccolamd.o cholmod_csymamd.o cholmod_metis.o cholmod_nesdis.o cholmod_camd.o cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o cholmod_l_ccolamd.o cholmod_l_csymamd.o cholmod_l_metis.o cholmod_l_nesdis.o cholmod_l_camd.o -o /data/ci-build/generic/centos7/x86_64/SuiteSparse/4.5.5-mpi-1.8.8-gcc-6.3.0/lib/libcholmod.so.3.0.11 -lm -lrt -Wl,-rpath=/data/ci-build/generic/centos7/x86_64/SuiteSparse/4.5.5-mpi-1.8.8-gcc-6.3.0/lib -lamd -lcolamd -lsuitesparseconfig -lccolamd -lcamd -lmetis -llapack -lopenblas
/usr/bin/ld: cannot find -llapack
/usr/bin/ld: cannot find -lopenblas

Seems LDFLAGS are missing

jenkinsSAGrid commented 7 years ago

Build was fixed!