Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence information of pangenomic blocks of sequence or genes in a browser-like display.
For better display, the annotation track could be turned into a beeswarm plot, x positions would always be faithful to the data, and y position would be modified according to the available space.
For better display, the annotation track could be turned into a beeswarm plot, x positions would always be faithful to the data, and y position would be modified according to the available space.
Here is a nice example of how it could look : https://observablehq.com/@d3/beeswarm
Whe can keep square marks instead of the circles from the example