Spandex-at-Exeter / demography_database

Demography Database - Flask web application incorporating COMPADRE and COMADRE
http://demography.ex.ac.uk/
MIT License
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Add fields for seed bank, clonality and vectors (proportions and abundance sep) in species/population db model #138

Closed simonrolph closed 7 years ago

simonrolph commented 7 years ago

Seedbank - boolean Clonality - ramet or genet

Spandex-CDO commented 7 years ago

@simonrolph @robcito are these fields - i) whether the Species should normally have a seedbank True or FALSE (species model)? ii) whether the population being studied, studied the Ramets or the Genets (population model)?

RobSalGo commented 7 years ago

both should be MPM attributes rob s-g

New book on the Evolution of Senescence in the Tree of Life http://tinyurl.com/SenescenceBook

"Aliud iter ad prosperitatem nos est: id est omnibus rebus vincere" .:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:.:. Dr Rob Salguero-Gómez NERC Independent Research Fellow at the University of Sheffield Honorary research fellow of the University of Queensland Guest researcher of the Max Planck Institute for Demographic Research https://www.sheffield.ac.uk/aps/staff-and-students/acadstaff/salguero-gomez http://sites.google.com/site/RobResearchSite/

On 20 Feb 2017, at 20:57, CDO-at-Exeter notifications@github.com<mailto:notifications@github.com> wrote:

@simonrolphhttps://github.com/simonrolph @robcitohttps://github.com/robcito are these fields - i) whether the Species should normally have a seedbank True or FALSE (species model)? ii) whether the population being studied, studied the Ramets or the Genets (population model)?

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHubhttps://github.com/Spandex-at-Exeter/demography_database/issues/138#issuecomment-281179627, or mute the threadhttps://github.com/notifications/unsubscribe-auth/ADRBOsWDT6RO0I5oAfaaHi9BU5Vyqg3pks5ref45gaJpZM4MFD5S.

Spandex-CDO commented 7 years ago

@robcito I just need to clarify this one more time pretty please! Please circle a or b as appropriate

The seedbank column (TRUE/FALSE) is: a) whether the individual matrix currently contains a seedbank class? or b) whether the species they studied is known to have a seedbank in 'real-life'?

The clonality column (TRUE/FALSE) is: a) whether the individual matrix contains clonality? or b) whether the species they studied here is known to be clonal?

Thank you

Danny

RobSalGo commented 7 years ago

@robcitohttps://github.com/robcito I just need to clarify this one more time pretty please! Please circle a or b as appropriate

The seedbank column (TRUE/FALSE) is: a) whether the individual matrix currently contains a seedbank class? FALSE or b) whether the species they studied is known to have a seedbank in 'real-life’? TRUE

The clonality column (TRUE/FALSE) is: a) whether the individual matrix contains clonality? FALSE or b) whether the species they studied here is known to be clonal? TRUE

Thank you

Danny

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHubhttps://github.com/Spandex-at-Exeter/demography_database/issues/138#issuecomment-287064424, or mute the threadhttps://github.com/notifications/unsubscribe-auth/ADRBOpZLh-q2HCwY7CRh9MDGoJ4pR3Xaks5rmT_bgaJpZM4MFD5S.

DannyLBuss commented 7 years ago

Amazing! Thanks Rob