Feature Overview

[Kohze]

SpatialMaps Feature List:

pRolocdata:

• [x] Registration
• [x] Login
• [x] Password Reset
• [x] Object Upload
• [x] Object Download
• [x] Database Backup (with DB secret)

Enhancements:

• [x] Upload private dataset
• [x] Toggle private to public dataset

SpatialMaps: Front Page:

• [x] Introduction
• [x] Idea & Foundation
• [x] Technology

About Page:

• [ ] Video Animation
• [x] Environment
• [x] R & SpatialMaps
• [x] Collaboration and Open Data

Login Page:

• [x] Login
• [x] Register
• [X] Password Reset
• [x] Change password

Profile Page:

• [x] Upload file / dataset
• [x] show uploaded datasets (with public/private toggle)
• [x] private link share functionality

Datasets Page:

• [x] Search Bar & Filters
• [x] Datasets: Metadata
• [ ] Datasets: SpatialDistribution Image
• [x] Datasets: Name
• [x] Datasets: Species Image

Enhancements:

• [x] Show accessible private dataset (own data sets and shared ones)

DataView Page: Top-left:

• [x] Comments
• [x] Download
• [x] MetaData
• [x] Scatter point size
• [x] Hide/Color Unknown

Top-right:

• [x] PCA toggle
• [x] T-SNE toggle
• [x] Profile toggle
• [x] UniProt toggle

Main Plot: PCA / T-SNE plot:

• [x] clickable points
• [x] dynamic zooming
• [x] coordinate axes
• [x] dynamic point size
• [x] dynamic color (based on column)

Profile plot:

• [x] brush select lines to filter
• [x] dynamic coloring
• [x] axis-inversion and movement

UniProt / API Module:

• [x] Load additional data via Iframe

Sub-Plot Area:

• [x] Filter Search
• [x] Legend Buttons (with colored border, clickable to toggle points)
• [x] Plot Reset Button
• [x] Plot Enlarge/Minify Button
• [x] Additional Tools (zoom tool, drag tool)

Table: Clickable table headers

• [x] Color by column
• [x] Radius by column
• [x] Transparency by column
• [x] Sort by column
• [x] Dynamic table columns (drag to enlarge)

Documentation Overview Page:

• [x] SpatialMaps
• [x] pRoloc
• [x] MSnbase
• [x] API (could be replaced by something more meaningful)
• [x] Data Storage
• [x] Accounts