Use preprocessed logcounts as input.

Spencerfar / LatentVelo

MIT License

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Use preprocessed logcounts as input. #9

Open VivLon opened 2 weeks ago

VivLon commented 2 weeks ago

Hi,

Can I use preprocessed logcounts as input data? I tried setting normalize_library and log as False in ltv.utils.standard_clean_recipe(), it still preprocess the spliced and unspliced layers. Any suggestions?

Thanks.

VivLon commented 2 weeks ago

Another problem is, after setting normalize_library and log as False in ltv.utils.standard_clean_recipe() and running train_vae(), it raises KeyError: 'spliced_size_factor'