get and format Allen dataset: spike trains and stimulus labels

SpikeAI / 2022-11_brainhack_DetecSpikMotifs

2022-11_brainhack_DetecSpikMotifs: Automatic detection of spiking motifs in neurobiological data. This project aims to develop a method for the automated detection of repeating spiking motifs, possibly noisy, in ongoing activity.

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get and format Allen dataset: spike trains and stimulus labels #2

Open MatthieuGilson opened 1 year ago

MatthieuGilson commented 1 year ago

with general ref https://allensdk.readthedocs.io/en/latest/visual_coding_neuropixels.html:

install allensdk (python library to download data), meaning installing python anaconda, etc.
run example notebook https://allensdk.readthedocs.io/en/latest/_static/examples/nb/ecephys_quickstart.html to retrieve spike trains and stimuli types
check other possible sessions