SpikeInterface / spikeinterface

A Python-based module for creating flexible and robust spike sorting pipelines.
https://spikeinterface.readthedocs.io
MIT License
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This meta file version of spikeglxis not implemented #2371

Closed JonathanAMichaels closed 11 months ago

JonathanAMichaels commented 11 months ago

I'm getting this error when trying to load a spikeglx recording of the new long neuropixels:

NotImplementedError: This meta file version of spikeglxis not implemented

I'm using the most recent spikeinterface installed from github today.

Here's the info from the meta file:

acqApLfSy=384,384,1 appVersion=20230905 fileCreateTime=2023-12-22T11:53:44 fileName=D://122223_g0/122223_g0_imec0/122223_g0_t0.imec0.ap.bin fileSHA1=58569735F67F75C7AEA059DDE8C3C78FEC6805DA fileSizeBytes=77965530720 fileTimeSecs=3375.1312 firstSample=3556716 gateMode=Immediate imAiRangeMax=0.6 imAiRangeMin=-0.6 imAnyChanFullBand=false imCalibrated=true imChan0apGain=500 imDatApi=3.62 imDatBs_fw=2.0.169 imDatBsc_fw=3.2.189 imDatBsc_hw=2.1 imDatBsc_pn=NP2_QBSC_00 imDatBsc_sn=207 imDatFx_hw=3.6 imDatFx_pn=NPNH_AFLEX_00 imDatFx_sn=0 imDatHs_hw=5.1 imDatHs_pn=NP2_HS_30 imDatHs_sn=835 imDatPrb_dock=1 imDatPrb_pn=NP1032 imDatPrb_port=4 imDatPrb_slot=2 imDatPrb_sn=22176116182 imDatPrb_type=1030 imErrFlags_IS_CT_SR_LK_PP_SY=0 0 0 0 0 0 imIsSvyRun=false imLEDEnable=false imLowLatency=false imMaxInt=512 imSampRate=30000 imStdby= imSvyMaxBnk=11 imSvySecPerBnk=15 imTipLength=373 imTrgRising=true imTrgSource=0 imroFile= nDataDirs=1 nSavedChans=385 snsApLfSy=384,0,1 snsSaveChanSubset=0:383,768 syncImInputSlot=2 syncSourceIdx=0 syncSourcePeriod=1 trigMode=Immediate typeImEnabled=1 typeNiEnabled=0 typeObEnabled=0 typeThis=imec userNotes= ~imroTbl=(1030,384)(0 0 0 500 250 1)(1 0 0 500 250 1)(2 0 0 500 250 1)(3 0 0 500 250 1)(4 0 0 500 250 1)(5 0 0 500 250 1)(6 0 0 500 250 1)(7 0 0 500 250 1)(8 0 0 500 250 1)(9 0 0 500 250 1)(10 0 0 500 250 1)(11 0 0 500 250 1)(12 0 0 500 250 1)(13 0 0 500 250 1)(14 0 0 500 250 1)(15 0 0 500 250 1)(16 0 0 500 250 1)(17 0 0 500 250 1)(18 0 0 500 250 1)(19 0 0 500 250 1)(20 0 0 500 250 1)(21 0 0 500 250 1)(22 0 0 500 250 1)(23 0 0 500 250 1)(24 0 0 500 250 1)(25 0 0 500 250 1)(26 0 0 500 250 1)(27 0 0 500 250 1)(28 0 0 500 250 1)(29 0 0 500 250 1)(30 0 0 500 250 1)(31 0 0 500 250 1)(32 0 0 500 250 1)(33 0 0 500 250 1)(34 0 0 500 250 1)(35 0 0 500 250 1)(36 0 0 500 250 1)(37 0 0 500 250 1)(38 0 0 500 250 1)(39 0 0 500 250 1)(40 0 0 500 250 1)(41 0 0 500 250 1)(42 0 0 500 250 1)(43 0 0 500 250 1)(44 0 0 500 250 1)(45 0 0 500 250 1)(46 0 0 500 250 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JonathanAMichaels commented 11 months ago

I was able to solve this by installing the latest neo from github

pip install git+https://github.com/NeuralEnsemble/python-neo.git