Open meszena opened 4 months ago
Hi Domi,
I think that the problems i that you're getting NaN
estimates of unit locations, since the error comes from
--> spikeinterface/src/spikeinterface/widgets/unit_summary.py:107) ax1.set_xlim(x - 80, x + 80)
We should definitely protect against something like this interfering with plotting. I'll make a PR soon :)
Thanks, Alessio! Much appreciated!:)
Hi! I would have a question: I loaded back one of my external KS and Phy curated outputs to SortingAnalyzer and I've been able to calculate the various nice quality metrics but somehow I am not able to save the data (and the generated plots) as a report because (I think) there are NaNs or INFs in my unit metrics table (this is just a guess, maybe it is due to something else).
Interestingly, I am still able to save the results as a .csv, like this:
_from spikeinterface.qualitymetrics import compute_quality_metrics df = compute_quality_metrics(analyzer_clean) df.to_csv(".../analyzer_TestKS1/test.csv")
I just cannot do the "report" and the "web-based viewer", which also worked well earlier with your tutorial data (so it should not be an installing issue, I hope).
Thanks so much in advance for any input!
I got the following warning and error when exporting the results: