adding verkko version 2.1

[erinyoung]

There's a new version of verkko!

The release notes indicate that there are some performance enhancements and bug fixes.

For this Dockerfile, I updated the base image to micromamba version 1.5.8, updated the version ARG, removed MAMBA_DOCKERFILE_ACTIVATE=1 since everything was added to PATH, and added --help to the test layer.

The full diff:

$ diff verkko/2.0/Dockerfile verkko/2.1/Dockerfile 
1c1
< FROM mambaorg/micromamba:1.5.6 as app
---
> FROM mambaorg/micromamba:1.5.8 as app
3c3
< ARG VERKKO_VER="2.0"
---
> ARG VERKKO_VER="2.1"
9c9
< LABEL base.image="mambaorg/micromamba:1.5.6"
---
> LABEL base.image="mambaorg/micromamba:1.5.8"
37,38c37
< ENV ENV_NAME="base"
< ARG MAMBA_DOCKERFILE_ACTIVATE=1
---
> RUN verkko --help

Pull Request (PR) checklist:

• [X] Include a description of what is in this pull request in this message.
• [X] The dockerfile successfully builds to a test target for the user creating the PR. (i.e. docker build --tag samtools:1.15test --target test docker-builds/samtools/1.15 )
• [X] Directory structure as name of the tool in lower case with special characters removed with a subdirectory of the version number (i.e. spades/3.12.0/Dockerfile)
  • [X] (optional) All test files are located in same directory as the Dockerfile (i.e. shigatyper/2.0.1/test.sh)
• [X] Create a simple container-specific README.md in the same directory as the Dockerfile (i.e. spades/3.12.0/README.md)
  • [X] If this README is longer than 30 lines, there is an explanation as to why more detail was needed
• [X] Dockerfile includes the recommended LABELS
• [X] Main README.md has been updated to include the tool and/or version of the dockerfile(s) in this PR
• [X] Program_Licenses.md contains the tool(s) used in this PR and has been updated for any missing

[Kincekara]

Thank you for the update! I also removed the curl I forgot to delete from the app stage in 2.0. I am merging and deploying this.

[Kincekara]

Deploy link: https://github.com/StaPH-B/docker-builds/actions/runs/9681674813