StaPH-B / docker-builds

:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
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adding bakta version 1.9.4 #1034

Closed erinyoung closed 1 month ago

erinyoung commented 1 month ago

There's a new version of batka!

According to the release notes this is mainly bug fixes.

I updated the software version to 1.9.4 and the base image to 1.5.8. I also removed a comment.

I also check updating diamond, but it ran into compatibility problems.

the full diff

$ diff bakta/1.9.3/Dockerfile bakta/1.9.4/Dockerfile
1c1
< FROM mambaorg/micromamba:1.5.7 as app
---
> FROM mambaorg/micromamba:1.5.8 as app
3c3
< ARG BAKTA_VER="1.9.3"
---
> ARG BAKTA_VER="1.9.4"
7c7
< LABEL base.image="mambaorg/micromamba:1.5.7"
---
> LABEL base.image="mambaorg/micromamba:1.5.8"
37,38d36
< 
< #export BAKTA_DB=/test/db-light

Once this PR is merged, I will put one together for the 1.9.4-5.1-light tag (the database looks like it's still version 5.1).

Pull Request (PR) checklist:

Kincekara commented 1 month ago

Thank you for the update! I added "-f" to "micromamba clean". Deploy link: https://github.com/StaPH-B/docker-builds/actions/runs/10509282220