According to the release notes, there a new feature where the summary table can group samples together. It looks really nice.
For the most part, I just copied a prior Dockerfile and update the version arg. I also added the -vv flag.
$ diff multiqc/1.22.3/Dockerfile multiqc/1.25/Dockerfile
3c3
< ARG MULTIQC_VER="1.22.3"
---
> ARG MULTIQC_VER="1.25"
21c21
< RUN pip3 install --no-cache-dir "multiqc==${MULTIQC_VER}"
---
> RUN pip3 install --no-cache-dir -vv "multiqc==${MULTIQC_VER}"
47,48c47
< ls multiqc_report.html
<
---
> ls multiqc_report.html
Pull Request (PR) checklist:
[X] Include a description of what is in this pull request in this message.
[X] The dockerfile successfully builds to a test target for the user creating the PR. (i.e. docker build --tag samtools:1.15test --target test docker-builds/samtools/1.15 )
[X] Directory structure as name of the tool in lower case with special characters removed with a subdirectory of the version number (i.e. spades/3.12.0/Dockerfile)
[X] (optional) All test files are located in same directory as the Dockerfile (i.e. shigatyper/2.0.1/test.sh)
[X] Create a simple container-specific README.md in the same directory as the Dockerfile (i.e. spades/3.12.0/README.md)
[X] If this README is longer than 30 lines, there is an explanation as to why more detail was needed
There's a new version of multiqc!
According to the release notes, there a new feature where the summary table can group samples together. It looks really nice.
For the most part, I just copied a prior Dockerfile and update the version arg. I also added the
-vv
flag.Pull Request (PR) checklist:
docker build --tag samtools:1.15test --target test docker-builds/samtools/1.15
)spades/3.12.0/Dockerfile
)shigatyper/2.0.1/test.sh
)spades/3.12.0/README.md
)