search

StaPH-B / staphb_toolkit

Python Toolkit for using containerized programs in either Singularity or Docker
https://staph-b.github.io/staphb_toolkit/
GNU General Public License v3.0
26 stars 19 forks source link

How to run toolkit without internet access #91

Open caleb-lindgren opened 1 year ago

caleb-lindgren commented 1 year ago

I'm trying to use this tool in a high-performance computing environment without internet access. I keep getting this error: "Error: Cannot connect to GitHub to get app inventory." How can I avoid this?

k-florek commented 1 year ago

Unfortunately the StaPH-B Toolkit is dependent on internet access. Both the docker applications and the workflows are retrieved from docker hub and github respectively when requested and are not packaged with the Toolkit, this ensures that the user always has access to the latest versions of everything.

That said I can see how having offline access could be important in certain environments so I will add this to the planning for the next release but it may be sometime before I can add something like this.