StaPH-B / titan

Public health bioinformatics repository for WDL workflows to analyze viral genomes.
GNU Affero General Public License v3.0
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Parameter Review #1

Closed k-florek closed 3 years ago

k-florek commented 3 years ago

A review of each task in the Titan Illumina PE workflow is needed (Titan WDL). Ideally, each task will be reviewed by 2 people with a focus on the parameter settings to ensure that the parameters are set appropriately and make sense for the broader application of this workflow.

Please perform the following for each Task:

Please comment here with the task you reviewed and perform a pull request on any updates or changes to the code.

kevinlibuit commented 3 years ago

Task updates we've made on the Theiagen repo:

kevinlibuit commented 3 years ago

Updated VADR task to most resent stable tag (1.2)

*edit: formatting