search

StanfordBioinformatics / pulsar_lims

A LIMS for ENCODE submitting labs.
3 stars 1 forks source link

ENCODE data submission: multiomics SREQ-448 and SREQ-449 #896

Closed twang15 closed 2 years ago

twang15 commented 2 years ago

Hi Tao,

Thanks for sending the Ngn2 test submission. I will look at it tomorrow morning.

In the meantime, could you please submit the very last (!!!) mouse multiome experiments that John delivered yesterday (if possible on Monday because we have a call on Tuesday)?

This is SREQ-448 (scATAC) and 449 (snRNA) with the following multiome parings:

L-12076 with L-12104 L-12077 with L-12105 L-12078 with L-12106 L-12079 with L-12107 L-12068 with L-12072 L-12069 with L-12073 L-12070 with L-12074 L-12071 with L-12075

Thank you!!! Annika

twang15 commented 2 years ago

created all the issues

twang15 commented 2 years ago

submit all related experiments

twang15 commented 2 years ago

quality check of all experiments

twang15 commented 2 years ago

submit multiomics series: https://docs.google.com/spreadsheets/d/1bYJ8w2XqfR9El0dXEl9QJKXAjy58zL8b/edit#gid=1289523182

twang15 commented 2 years ago

Hi Annika,

All the 16 libraries have been submitted on the portal. Quality looks good.

Here is the list of all multiomics experiments: https://docs.google.com/spreadsheets/d/1bYJ8w2XqfR9El0dXEl9QJKXAjy58zL8b/edit#gid=1289523182

Best, Tao