implement other GPU based package to handel large scale cells (>1 million)

Starlitnightly / omicverse

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

https://starlitnightly.github.io/omicverse/

GNU General Public License v3.0

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implement other GPU based package to handel large scale cells (>1 million) #38

Closed xflicsu closed 2 months ago

xflicsu commented 6 months ago

Hi, omicverse integrated several useful methods related almost all the aspects of scRNA analysis. With the large datasets producing, GPU show great power to speed up the analysis. So, coulud you integrate other GPU based methods to handel million cells?

The rapids_singlecell maybe one suitable for task more than one million cells.

Starlitnightly commented 6 months ago

Hi,

The processed of large scale cells will add in omicverse's next version.

Sincerely,

Zehua