Starlitnightly / omicverse

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.
https://starlitnightly.github.io/omicverse/
GNU General Public License v3.0
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Fix the error #56

Closed mugpeng closed 5 months ago

mugpeng commented 5 months ago

The simba embedding function return embeddings of both cells and genes, so the genes should be removed. Details can be accessed on: Batch correction (multiple batches) — SIMBA 1.2 documentation