Closed EddieLv closed 1 year ago
adata_sub is about 4k cells and 25k genes, sdm.spatialdm_global(adata_sub, n_perm = 1000, specified_ind=None, method="z-score", nproc=6) cost about 2 minutes, however, sdm.spatialdm_global(adata_sub, n_perm = 1000, specified_ind=None, method="permutation", nproc=6) cost about 2 hours!
adata_sub is about 4k cells and 25k genes, sdm.spatialdm_global(adata_sub, n_perm = 1000, specified_ind=None, method="z-score", nproc=6) cost about 2 minutes, however, sdm.spatialdm_global(adata_sub, n_perm = 1000, specified_ind=None, method="permutation", nproc=6) cost about 2 hours!