StatBiomed / SpatialDM

Spatial direct messaging detected by bivariate Moran
https://spatialdm.readthedocs.io
Apache License 2.0
24 stars 5 forks source link

Supp Note 1 and Example #3

Closed wyq977 closed 1 year ago

wyq977 commented 1 year ago

Hi Zhuoxuan Li (@leeyoyohku).

When I am reading the paper on bioarxic, I couldn't find the Supp. Note 1 that contains the derivation for null distribution of Global Moran's R and other methodology. Can you send me a pdf or update the manuscript? That would be really helpful.

BTW, when I was running the examples (3 jupyter notebook), NaiveDE and SpatialDE needs to installed.

It would be helpful that you could add a short note for the requirement (just for the example not the requirement for the package)

e.g.

To run the examples notebooks, NaiveDE and SpatialDE needs to be installed.

NaiveDE

# latest version
pip install -U git+https://github.com/Teichlab/NaiveDE
# or pypi
# pip install NaiveDE

SpatialDE

pip install spatialde

hilearn

# latest version
pip install -U git+https://github.com/huangyh09/hilearn
# or pypi
# pip install hilearn
wyq977 commented 1 year ago

Also the badge image for the Travis CI is unknown

I don't think you have added a ci config in this repo. Let me know if u need help with a simple .travis.yml like python ci

Ref https://docs.travis-ci.com/user/status-images/