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StochSS / GillesPy2

Modeling toolkit for biochemical simulation
http://gillespy2.readthedocs.io/
GNU General Public License v3.0
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Need to make private, or remove methods #859

Closed briandrawert closed 1 month ago

briandrawert commented 2 years ago

The method sanitized_formula in gillespy2.core.assignmentrule.AssignmentRule should be private. Many methods in the docs should be private or deprecated.

briandrawert commented 2 years ago

In addition, many modules should not be in the docs. Such as: gillespy2.solvers.cpp.c_decoder module, gillespy2.solvers.cpp.c_solver module, etc...