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StochasticAnalytics
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emClarity
GNU Lesser General Public License v3.0
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Add explicit check for imod version
#73
bHimes
opened
6 years ago
0
Help needed in China, no access to google drive...
#72
hgxy15
closed
6 years ago
9
Update "WriteCsv" function from geometryAnalysis
#71
bHimes
opened
6 years ago
0
Add warning message for alignment cycle. Extend checking and remove case sensitivity.
#70
bHimes
opened
6 years ago
0
Check chimera call in fscGold calc
#69
bHimes
opened
6 years ago
0
Local resolution
#68
bHimes
opened
6 years ago
0
Option for pre-applied exposure filter
#67
bHimes
opened
6 years ago
0
Many tomogram mem overflow
#66
bHimes
opened
6 years ago
0
ctf estimation
#65
bHimes
closed
5 years ago
5
build instructions
#64
brevans
closed
1 year ago
6
Create LICENSE
#63
bHimes
closed
6 years ago
0
tutorial ctf estimate missing "param" specifications
#62
bHimes
closed
6 years ago
0
Move particle mass into the parameter file and set tomoCPR to take it from there
#61
bHimes
closed
6 years ago
1
Model editing based on tomoCPR results
#60
bHimes
opened
6 years ago
0
Prevent average3d from reconstructing tomos, instead instruct ctf 3d to be run
#59
bHimes
closed
6 years ago
0
Compare pixel size in header of ref to stack in templateSearch
#58
bHimes
opened
6 years ago
0
set pixel size in header in reScale
#57
bHimes
closed
6 years ago
0
nWorkers embedding
#56
bHimes
closed
6 years ago
1
Add new helical parameters to the master.param & docs
#55
bHimes
opened
6 years ago
0
doc: explain tilt-series dimension as upper limit on reconstruction size
#54
bHimes
opened
6 years ago
0
enforce border in recScript2.sh > 20 or 100 pixels or something (in Y particularly)
#53
bHimes
opened
6 years ago
0
Disable 2d ctf to prevent users from mistakenly going down this ave.
#52
bHimes
closed
6 years ago
0
add try catch to print explicit message on aliStacks check in multi_loadOrBin
#51
bHimes
opened
6 years ago
0
enable user to calc FSC with two maps from external source
#50
bHimes
opened
6 years ago
0
Notes from ccp-em workshop 2018
#49
bHimes
opened
6 years ago
0
add eucentric shift compensation
#48
bHimes
closed
6 years ago
1
Add call to gputilttest in emClarity check
#47
bHimes
opened
6 years ago
0
typo in *.erase2 in 2.5.4 of tutorial (earse)
#46
bHimes
closed
6 years ago
1
Error using importdata
#45
Luizammend
closed
6 years ago
1
scale change as decoy in template matching
#44
bHimes
closed
6 years ago
1
pad/trim consistency
#43
bHimes
opened
6 years ago
1
set PCA to get nWorkers from parcluster and not param file
#42
bHimes
opened
6 years ago
0
tutorial for fget on data .mrc --> mrcs (tomo vs tilt)
#41
bHimes
closed
6 years ago
1
Change all non IMOD/Chimera calls from "system" to "unix"
#40
bHimes
opened
6 years ago
0
anisotropic distortion in Fourier resampling
#39
bHimes
closed
6 years ago
1
Get rid of 2d CTF options
#38
bHimes
opened
6 years ago
0
simplify classification for release
#37
bHimes
closed
6 years ago
2
add info print out if user just types "emClarity"
#36
bHimes
closed
6 years ago
1
Center of mass shift for reference misbehaves at times
#35
bHimes
opened
6 years ago
0
Bayesian worldview
#34
bHimes
opened
6 years ago
0
Symmetry 2 - write function to find symmetry axis explicitly
#33
bHimes
opened
6 years ago
0
Symmetry 1 - extend from Cn to D/O/I groups
#32
bHimes
opened
6 years ago
0
mapBack1 folder to project specific name
#31
bHimes
closed
6 years ago
0
Update erasemod after tomoCPR
#30
bHimes
opened
6 years ago
0
something like an imod "tomosnapshot"
#29
bHimes
opened
6 years ago
0
slow reads on platters
#28
bHimes
opened
6 years ago
1
speed up averaging
#27
bHimes
opened
6 years ago
0
sampling rate check
#26
bHimes
opened
6 years ago
0
fix mention of outdated parameters in the alignment tutorial vid
#25
bHimes
opened
6 years ago
0
fixed stack and imodtrans typos in tutorial
#24
bHimes
closed
6 years ago
1
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