StoreyLab / qvalue

R package to estimate q-values and false discovery rate quantities.
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qvalue database is corrupt with R 4.4.0 #40

Open SerenaCaplins opened 2 months ago

SerenaCaplins commented 2 months ago

I get this error when trying to run qvalue in R 4.4.0

Error: lazy-load database '/home/s.caplins/R/x86_64-pc-linux-gnu-library/4.2/qvalue/R/qvalue.rdb' is corrupt In addition: Warning message: internal error 1 in R_decompress1 with libdeflate

Also get segmentation fault when trying to install qvalue in R 4.4.0 in a dockerfile.

I think in the above example the installation worked but it went to the 4.2 directory (this may be an issue with my setup). But even with it not failing at installation in R 4.4.0 it fails when I try to run it as above.

Has qvalue been checked for security issues that were addressed in R 4.4.0?