SuLab / scheduled-bots

GeneWiki Scheduled Bots
MIT License
9 stars 15 forks source link

BRAF has no Ensembl Gene ID anymore #21

Closed floatingpurr closed 5 years ago

floatingpurr commented 5 years ago

Hey guys, I noticed that BRAF lost its Ensembl Gene ID. Probably, it was removed on Aug, 16 by ProteinBoxBot. AFAIK this is the last item version with the Ensembl ID.

I'm not sure it is normal. It could be a symptom of a more general problem which may compromise mappings/queries based on Ensembl Gene IDs.

stuppie commented 5 years ago

Hmm, that's weird. Looking at the logs, it removed the ensembl ID off of 305 (out of ~20k genes). Why? Looking at the IDs of the ones it did this on, it looks like they were among the most recently modified. Possibly the SPARQL endpoint hadn't finished updating and it got conflicting data... Running bot again and will check them. Thanks