There are currently 80 items that have a BP annotation to single organismal cell-cell adhesion, despite that term being deprecated by GO. I spot checked a few (e.g., https://www.uniprot.org/uniprot/P35222) and those annotations appear to no longer exist. I would have expected the GO bot to delete these annotations then. We should investigate whether this is the intended bot behavior for reasons I'm forgetting, or whether this is a bug / edge case that needs to be dealt with.
(side note -- would be interested to know how many deprecated GO terms are in WD currently... that would give us a sense of the scale of the issue here.)
andrawaag
commented
5 years ago
There are currently 80 items that have a BP annotation to single organismal cell-cell adhesion, despite that term being deprecated by GO. I spot checked a few (e.g., https://www.uniprot.org/uniprot/P35222) and those annotations appear to no longer exist. I would have expected the GO bot to delete these annotations then. We should investigate whether this is the intended bot behavior for reasons I'm forgetting, or whether this is a bug / edge case that needs to be dealt with.
(side note -- would be interested to know how many deprecated GO terms are in WD currently... that would give us a sense of the scale of the issue here.)