Closed Sum02dean closed 2 years ago
Talk with Damian on strange predictive behavior for a minority of incorrect predictions.
Solution steps:
Given an example list of the protein names, demonstrating the strange behavior, measure the class entropy and predictive variance.
Note, the proteins are not necessarily encoded closely in genome space
Sanity check, first check if these observation have any pathway membership, if so, check to see if the labels coincide with the high scores (y==1)
Talk with Damian on strange predictive behavior for a minority of incorrect predictions.
Solution steps:
Given an example list of the protein names, demonstrating the strange behavior, measure the class entropy and predictive variance.
Note, the proteins are not necessarily encoded closely in genome space
Sanity check, first check if these observation have any pathway membership, if so, check to see if the labels coincide with the high scores (y==1)