Closed amvarani closed 8 months ago
The process of chromosomal evolution presented here deviates considerably from prior methodologies, moving beyond a mere straightforward mapping. The emphasis is placed on identifying both the shared and unique chromosomal structural variations across different species, providing a more nuanced understanding of genetic diversity.
Dear @SunPengChuan , I need your help again
I was following your documentation on: https://github.com/SunPengChuan/wgdi-example/blob/main/Karyotype_Evolution.md and trying to generate a paleogenomics analysis of my species, which is close to Populus-Salix.
Following the example, I got it![image](https://github.com/SunPengChuan/wgdi/assets/3044067/3aad032c-bc18-4b7a-97a7-5b4763646a71)
After using -bk my results are:![image](https://github.com/SunPengChuan/wgdi/assets/3044067/4978b0bf-0fd9-4317-bb08-7b6ce84e1a3e)
Finally, when I map using the -km to map AEK I got only seven chromossomes from the AEK, and have this:
I would also like to plot the Karyotype style figure. Can you help me ?