Closed tiramisutes closed 3 years ago
The blast file may not correspond to your gff or lens.
How can get more detailed stderr information? Such as which file or which row or which gene id caused this error? Thanks.
I think I found the problem. Example I have follows gff file. gff1👇
A1 A11.1 17370 26509 + 1 A11
gff2👇
B1 B11.1 17370 26509 + 1 B11
Then the blastp file should have same order. It's meaning the gene id in first column should be from gff1 and gene id in second column should be from gff2.
A11.1 B11.1 86.786 1120 113 3 1 1119 1 1086 0.0 1982
Hi, I get follows stderr when run
wgdi -icl
for collinearity.I have tried my best to find a solution. But no ideal. So, can you help me? Thankls.