Closed SwiftSeal closed 2 days ago
Following env works fine? apart from scikit-learn
crying
Name Version Build Channel
──────────────────────────────────────────────────────────────────────────────────────────
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_kmp_llvm conda-forge
aiohappyeyeballs 2.4.3 pyhd8ed1ab_0 conda-forge
aiohttp 3.11.8 py312h178313f_0 conda-forge
aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge
antlr-python-runtime 4.9.3 pyhd8ed1ab_1 conda-forge
attrs 24.2.0 pyh71513ae_0 conda-forge
aws-c-auth 0.8.0 hb88c0a9_10 conda-forge
aws-c-cal 0.8.0 hecf86a2_2 conda-forge
aws-c-common 0.10.3 hb9d3cd8_0 conda-forge
aws-c-compression 0.3.0 hf42f96a_2 conda-forge
aws-c-event-stream 0.5.0 h1ffe551_7 conda-forge
aws-c-http 0.9.1 hab05fe4_2 conda-forge
aws-c-io 0.15.2 hdeadb07_2 conda-forge
aws-c-mqtt 0.11.0 h7bd072d_8 conda-forge
aws-c-s3 0.7.2 h3a84f74_0 conda-forge
aws-c-sdkutils 0.2.1 hf42f96a_1 conda-forge
aws-checksums 0.2.2 hf42f96a_1 conda-forge
aws-crt-cpp 0.29.5 h0e61686_1 conda-forge
aws-sdk-cpp 1.11.449 hdaa582e_3 conda-forge
azure-core-cpp 1.14.0 h5cfcd09_0 conda-forge
azure-identity-cpp 1.10.0 h113e628_0 conda-forge
azure-storage-blobs-cpp 12.13.0 h3cf044e_1 conda-forge
azure-storage-common-cpp 12.8.0 h736e048_1 conda-forge
azure-storage-files-datalake-cpp 12.12.0 ha633028_1 conda-forge
biopython 1.84 py312h9a8786e_0 conda-forge
biotite 1.0.1 py312hca68cad_0 conda-forge
biotraj 1.2.2 py312h2ec8cdc_0 conda-forge
brotli-python 1.1.0 py312h2ec8cdc_2 conda-forge
bzip2 1.0.8 h4bc722e_7 conda-forge
c-ares 1.34.3 hb9d3cd8_1 conda-forge
ca-certificates 2024.8.30 hbcca054_0 conda-forge
certifi 2024.8.30 pyhd8ed1ab_0 conda-forge
cffi 1.17.1 py312h06ac9bb_0 conda-forge
charset-normalizer 3.4.0 pyhd8ed1ab_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
coverage 7.6.8 py312h178313f_0 conda-forge
cpython 3.12.7 py312hd8ed1ab_0 conda-forge
datasets 3.1.0 pyhff2d567_0 conda-forge
dill 0.3.8 pyhd8ed1ab_0 conda-forge
exceptiongroup 1.2.2 pyhd8ed1ab_0 conda-forge
fair-esm 2.0.0 pyhd8ed1ab_0 conda-forge
filelock 3.16.1 pyhd8ed1ab_0 conda-forge
frozenlist 1.5.0 py312h66e93f0_0 conda-forge
fsspec 2024.9.0 pyhff2d567_0 conda-forge
gflags 2.2.2 h5888daf_1005 conda-forge
glog 0.7.1 hbabe93e_0 conda-forge
gmp 6.3.0 hac33072_2 conda-forge
gmpy2 2.1.5 py312h7201bc8_2 conda-forge
googledrivedownloader 0.4 pyhd3deb0d_1 conda-forge
h2 4.1.0 pyhd8ed1ab_0 conda-forge
hmmer 3.4 hdbdd923_2 bioconda
hpack 4.0.0 pyh9f0ad1d_0 conda-forge
huggingface_hub 0.26.2 pyh0610db2_0 conda-forge
hyperframe 6.0.1 pyhd8ed1ab_0 conda-forge
idna 3.10 pyhd8ed1ab_0 conda-forge
iniconfig 2.0.0 pyhd8ed1ab_0 conda-forge
isodate 0.7.2 pyhd8ed1ab_0 conda-forge
jinja2 3.1.4 pyhd8ed1ab_0 conda-forge
joblib 1.4.2 pyhd8ed1ab_0 conda-forge
keyutils 1.6.1 h166bdaf_0 conda-forge
krb5 1.21.3 h659f571_0 conda-forge
ld_impl_linux-64 2.43 h712a8e2_2 conda-forge
libabseil 20240722.0 cxx17_h5888daf_1 conda-forge
libarrow 18.1.0 h94eee4b_0_cpu conda-forge
libarrow-acero 18.1.0 h5888daf_0_cpu conda-forge
libarrow-dataset 18.1.0 h5888daf_0_cpu conda-forge
libarrow-substrait 18.1.0 h5c8f2c3_0_cpu conda-forge
libblas 3.9.0 25_linux64_openblas conda-forge
libbrotlicommon 1.1.0 hb9d3cd8_2 conda-forge
libbrotlidec 1.1.0 hb9d3cd8_2 conda-forge
libbrotlienc 1.1.0 hb9d3cd8_2 conda-forge
libcblas 3.9.0 25_linux64_openblas conda-forge
libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
libcurl 8.10.1 hbbe4b11_0 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 hd590300_2 conda-forge
libevent 2.1.12 hf998b51_1 conda-forge
libexpat 2.6.4 h5888daf_0 conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libgcc 14.2.0 h77fa898_1 conda-forge
libgcc-ng 14.2.0 h69a702a_1 conda-forge
libgfortran 14.2.0 h69a702a_1 conda-forge
libgfortran5 14.2.0 hd5240d6_1 conda-forge
libgoogle-cloud 2.31.0 h804f50b_0 conda-forge
libgoogle-cloud-storage 2.31.0 h0121fbd_0 conda-forge
libgrpc 1.67.1 hc2c308b_0 conda-forge
libhwloc 2.11.1 default_hecaa2ac_1000 conda-forge
libiconv 1.17 hd590300_2 conda-forge
liblapack 3.9.0 25_linux64_openblas conda-forge
libnghttp2 1.64.0 h161d5f1_0 conda-forge
libnsl 2.0.1 hd590300_0 conda-forge
libopenblas 0.3.28 pthreads_h94d23a6_1 conda-forge
libparquet 18.1.0 h6bd9018_0_cpu conda-forge
libprotobuf 5.28.2 h5b01275_0 conda-forge
libre2-11 2024.07.02 hbbce691_1 conda-forge
libsentencepiece 0.2.0 h413892a_9 conda-forge
libsqlite 3.47.0 hadc24fc_1 conda-forge
libssh2 1.11.1 hf672d98_0 conda-forge
libstdcxx 14.2.0 hc0a3c3a_1 conda-forge
libstdcxx-ng 14.2.0 h4852527_1 conda-forge
libthrift 0.21.0 h0e7cc3e_0 conda-forge
libtorch 2.5.1 cpu_mkl_hb9d73ce_103 conda-forge
libutf8proc 2.8.0 h166bdaf_0 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libuv 1.49.2 hb9d3cd8_0 conda-forge
libxcrypt 4.4.36 hd590300_1 conda-forge
libxml2 2.13.5 h064dc61_0 conda-forge
libzlib 1.3.1 hb9d3cd8_2 conda-forge
llvm-openmp 19.1.4 h024ca30_0 conda-forge
lz4-c 1.9.4 hcb278e6_0 conda-forge
markdown-it-py 3.0.0 pyhd8ed1ab_0 conda-forge
markupsafe 3.0.2 py312h178313f_0 conda-forge
mdurl 0.1.2 pyhd8ed1ab_0 conda-forge
mkl 2024.2.2 ha957f24_16 conda-forge
mpc 1.3.1 h24ddda3_1 conda-forge
mpfr 4.2.1 h90cbb55_3 conda-forge
mpmath 1.3.0 pyhd8ed1ab_0 conda-forge
msgpack-python 1.1.0 py312h68727a3_0 conda-forge
multidict 6.1.0 py312h178313f_1 conda-forge
multiprocess 0.70.16 py312h66e93f0_1 conda-forge
ncurses 6.5 he02047a_1 conda-forge
networkx 3.4.2 pyh267e887_2 conda-forge
numpy 2.1.3 py312h58c1407_0 conda-forge
omegaconf 2.3.0 pyhd8ed1ab_0 conda-forge
openssl 3.4.0 hb9d3cd8_0 conda-forge
orc 2.0.3 he039a57_0 conda-forge
packaging 24.2 pyhff2d567_1 conda-forge
pandas 2.2.3 py312hf9745cd_1 conda-forge
pip 24.3.1 pyh8b19718_0 conda-forge
pluggy 1.5.0 pyhd8ed1ab_0 conda-forge
propcache 0.2.0 py312h66e93f0_2 conda-forge
pyarrow 18.1.0 py312h7900ff3_0 conda-forge
pyarrow-core 18.1.0 py312h01725c0_0_cpu conda-forge
pycparser 2.22 pyhd8ed1ab_0 conda-forge
pygments 2.18.0 pyhd8ed1ab_0 conda-forge
pyparsing 3.2.0 pyhd8ed1ab_1 conda-forge
pysocks 1.7.1 pyha2e5f31_6 conda-forge
pytest 8.3.3 pyhd8ed1ab_0 conda-forge
pytest-cov 6.0.0 pyhd8ed1ab_0 conda-forge
python 3.12.7 hc5c86c4_0_cpython conda-forge
python-dateutil 2.9.0.post0 pyhff2d567_0 conda-forge
python-tzdata 2024.2 pyhd8ed1ab_0 conda-forge
python-wget 3.2 py_0 conda-forge
python-xxhash 3.5.0 py312h66e93f0_1 conda-forge
python_abi 3.12 5_cp312 conda-forge
pytorch 2.5.1 cpu_mkl_py312h01fbe9c_103 conda-forge
pytorch_geometric 2.1.0.post1 pyhd8ed1ab_0 conda-forge
pytorch_scatter 2.1.2 cpu_py312hb813311_9 conda-forge
pytorch_sparse 0.6.18 py312hb813311_5 conda-forge
pytz 2024.1 pyhd8ed1ab_0 conda-forge
pyyaml 6.0.2 py312h66e93f0_1 conda-forge
rdflib 7.1.1 pyh0610db2_0 conda-forge
re2 2024.07.02 h77b4e00_1 conda-forge
readline 8.2 h8228510_1 conda-forge
regex 2024.11.6 py312h66e93f0_0 conda-forge
requests 2.32.3 pyhd8ed1ab_0 conda-forge
rich 13.9.4 pyhd8ed1ab_0 conda-forge
rich-argparse 1.6.0 pyhd8ed1ab_0 conda-forge
s2n 1.5.9 h0fd0ee4_0 conda-forge
safetensors 0.4.5 py312h12e396e_0 conda-forge
scikit-learn 1.5.2 py312h7a48858_1 conda-forge
scipy 1.14.1 py312h62794b6_1 conda-forge
sentencepiece 0.2.0 h7900ff3_9 conda-forge
sentencepiece-python 0.2.0 py312he5bdc40_9 conda-forge
sentencepiece-spm 0.2.0 h413892a_9 conda-forge
setuptools 75.6.0 pyhff2d567_1 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
sleef 3.7 h1b44611_2 conda-forge
snappy 1.2.1 ha2e4443_0 conda-forge
sympy 1.13.3 pyh2585a3b_104 conda-forge
tbb 2021.13.0 h84d6215_0 conda-forge
threadpoolctl 3.5.0 pyhc1e730c_0 conda-forge
tk 8.6.13 noxft_h4845f30_101 conda-forge
tokenizers 0.20.4 py312h8360d73_0 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tomli 2.1.0 pyhff2d567_0 conda-forge
torch-scatter 2.1.1 py312hbc0f9b7_10 conda-forge
tqdm 4.67.1 pyhd8ed1ab_0 conda-forge
transformers 4.46.3 pyhd8ed1ab_0 conda-forge
typing-extensions 4.12.2 hd8ed1ab_0 conda-forge
typing_extensions 4.12.2 pyha770c72_0 conda-forge
tzdata 2024b hc8b5060_0 conda-forge
urllib3 2.2.3 pyhd8ed1ab_0 conda-forge
wheel 0.45.1 pyhd8ed1ab_0 conda-forge
xxhash 0.8.2 hd590300_0 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
yaml 0.2.5 h7f98852_2 conda-forge
yarl 1.18.0 py312h66e93f0_0 conda-forge
zstandard 0.23.0 py312hef9b889_1 conda-forge
zstd 1.5.6 ha6fb4c9_0 conda-forge
yeah lets fix this - what's the WORST that could happen
scikit-learn
dependency initially set as strict due toInconsistentVersionWarning
warnings. Tests indicate not an issue - removing this restriction would greatly reduce "strictness". Also need to checktransformers
dependency for similar.