search

SwissClinicalTrialOrganisation / pkg_validation

R Package Validation trial repo
https://swissclinicaltrialorganisation.github.io/pkg_validation/
0 stars 1 forks source link

[Package test]: statsFail version NA #35

Open aghaynes opened 1 month ago

aghaynes commented 1 month ago

Name

Alan Haynes

Name of the package you have tested

statsFail - issue to test machinery

What version of the package have you tested?

NA

Where was the package installed from?

Unknown - enter manually

If the package was installed from GitHub or similar (including r-universe), please provide a commit reference

NA

When was this package tested?

2024-04-15

What was tested?

Tests for package stats

Test results

FAIL

Test output

file context test nb passed skipped error warning
test-lm.R lm lm returns the expected coefficients 2 1 FALSE FALSE 1
test-lm.R lm Standard errors from lm are correct 1 0 FALSE FALSE 0

THE FOLLOWING ERRORS AND/OR WARNINGS WERE GENERATED: [[1]] [[1]][[1]] <expectation_warning/expectation/condition> check.attributes is deprecated; please use ignore_attr instead Backtrace: ▆

  1. └─testthat::expect_equal(coefs[1], means[1], check.attributes = FALSE) at test-lm.R:14:2
  2. └─testthat:::expect_waldo_equal("equal", act, exp, info, ..., tolerance = tolerance)
  3. └─testthat:::waldo_compare(...)
  4. └─waldo::compare(x, y, ..., x_arg = x_arg, y_arg = y_arg)
  5. └─waldo:::compare_opts(...)
  6. └─waldo:::old_opts(...)

[[1]][[2]] <expectation_success/expectation/condition> As expected

[[2]] [[2]][[1]] <expectation_failure/expectation/error/condition> summary(fmod)$coefficients[2, 2] (actual) not equal to 1 (expected).

actual: 1.6 expected: 1.0

Session info

R version 4.3.1 (2023-06-16 ucrt) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 19045)

Matrix products: default

locale: [1] LC_COLLATE=German_Switzerland.utf8 LC_CTYPE=German_Switzerland.utf8
[3] LC_MONETARY=German_Switzerland.utf8 LC_NUMERIC=C
[5] LC_TIME=German_Switzerland.utf8

time zone: Europe/Zurich tzcode source: internal

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] testthat_3.2.0 validation_0.3.2

loaded via a namespace (and not attached): [1] httr2_1.0.0 xfun_0.40 htmlwidgets_1.6.2 devtools_2.4.5 remotes_2.4.2.1
[6] gh_1.4.0 processx_3.8.2 callr_3.7.3 tzdb_0.4.0 vctrs_0.6.4
[11] tools_4.3.1 ps_1.7.5 generics_0.1.3 curl_5.1.0 tibble_3.2.1
[16] fansi_1.0.5 pkgconfig_2.0.3 desc_1.4.2 lifecycle_1.0.3 compiler_4.3.1
[21] stringr_1.5.0 brio_1.1.3 httpuv_1.6.12 htmltools_0.5.6.1 usethis_2.2.3
[26] yaml_2.3.7 later_1.3.1 pillar_1.9.0 crayon_1.5.2 urlchecker_1.0.1 [31] tidyr_1.3.0 ellipsis_0.3.2 cranlogs_2.1.1 cachem_1.0.8 sessioninfo_1.2.2 [36] pkgsearch_3.1.3 mime_0.12 tidyselect_1.2.0 digest_0.6.33 stringi_1.7.12
[41] rematch2_2.1.2 diffobj_0.3.5 dplyr_1.1.3 purrr_1.0.2 rprojroot_2.0.3
[46] fastmap_1.1.1 cli_3.6.1 magrittr_2.0.3 pkgbuild_1.4.2 utf8_1.2.4
[51] readr_2.1.4 withr_2.5.2 rappdirs_0.3.3 waldo_0.5.1 prettyunits_1.2.0 [56] promises_1.2.1 lubridate_1.9.3 timechange_0.2.0 roxygen2_7.3.0 rmarkdown_2.25
[61] httr_1.4.7 gitcreds_0.1.2 hms_1.1.3 memoise_2.0.1 shiny_1.8.0
[66] evaluate_0.22 knitr_1.45 miniUI_0.1.1.1 profvis_0.3.8 rlang_1.1.1
[71] Rcpp_1.0.11 xtable_1.8-4 glue_1.6.2 xml2_1.3.5 pkgload_1.3.3
[76] rstudioapi_0.15.0 jsonlite_1.8.7 R6_2.5.1 fs_1.6.3

Where is the test code located for these tests?

local

Where the test code is located in a git repository, add the git commit SHA

No response

github-actions[bot] commented 1 month ago

Tests have failed!

Please investigate:

github-actions[bot] commented 1 month ago

Tests have failed!

Please investigate: